Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 AL157888.1-201ENST00000631930 593 ntBASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TBC1D3DA0A087WVF3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 MIR3917-201ENST00000580971 93 ntBASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TBC1D3DA0A087WVF3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
TBC1D3DA0A087WVF3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
TBC1D3DA0A087WVF3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TBC1D3DA0A087WVF3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 KRT8P7-201ENST00000533003 1432 ntBASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TBC1D3DA0A087WVF3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 MIR564-202ENST00000385049 94 ntBASIC18.63■□□□□ 0.57
TBC1D3DA0A087WVF3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms