Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 MCRIP2P1-201ENST00000394346 511 ntBASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 AC016405.3-201ENST00000607710 860 ntBASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 AC012317.2-201ENST00000623305 2251 ntBASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV9-2A0A087WT02 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 AL589743.5-201ENST00000616611 1050 ntBASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 AL050303.2-201ENST00000619798 666 ntBASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 AL513477.1-201ENST00000602865 2407 ntBASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 AC010980.2-201ENST00000587099 1412 ntBASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV9-2A0A087WT02 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 MST1L-201ENST00000442552 2185 ntBASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 BX276092.2-201ENST00000417668 665 ntBASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 AC073210.2-201ENST00000430369 194 ntBASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV9-2A0A087WT02 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV9-2A0A087WT02 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms