Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA2Q9Y5H1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA2Q9Y5H1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA2Q9Y5H1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.62■■□□□ 1.69
PCDHGA2Q9Y5H1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA2Q9Y5H1 AC127502.1-201ENST00000399971 1502 ntBASIC25.62■■□□□ 1.69
PCDHGA2Q9Y5H1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 DUX4L18-201ENST00000553347 1267 ntBASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA2Q9Y5H1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA2Q9Y5H1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.6■■□□□ 1.69
PCDHGA2Q9Y5H1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
PCDHGA2Q9Y5H1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHGA2Q9Y5H1 AC007029.1-201ENST00000604183 313 ntBASIC25.58■■□□□ 1.69
PCDHGA2Q9Y5H1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
PCDHGA2Q9Y5H1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHGA2Q9Y5H1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.56■■□□□ 1.68
PCDHGA2Q9Y5H1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHGA2Q9Y5H1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHGA2Q9Y5H1 AL592293.1-201ENST00000502889 1188 ntBASIC25.55■■□□□ 1.68
PCDHGA2Q9Y5H1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHGA2Q9Y5H1 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.55■■□□□ 1.68
PCDHGA2Q9Y5H1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.54■■□□□ 1.68
PCDHGA2Q9Y5H1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 AC133552.2-201ENST00000619106 1032 ntBASIC25.53■■□□□ 1.68
PCDHGA2Q9Y5H1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA2Q9Y5H1 AL157400.5-201ENST00000507624 621 ntBASIC25.52■■□□□ 1.68
PCDHGA2Q9Y5H1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
PCDHGA2Q9Y5H1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA2Q9Y5H1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA2Q9Y5H1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA2Q9Y5H1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA2Q9Y5H1 AC009831.1-201ENST00000580420 1582 ntBASIC25.51■■□□□ 1.67
PCDHGA2Q9Y5H1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHGA2Q9Y5H1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PCDHGA2Q9Y5H1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.5■■□□□ 1.67
PCDHGA2Q9Y5H1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA2Q9Y5H1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA2Q9Y5H1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA2Q9Y5H1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA2Q9Y5H1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA2Q9Y5H1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHGA2Q9Y5H1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA2Q9Y5H1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA2Q9Y5H1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PCDHGA2Q9Y5H1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGA2Q9Y5H1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
PCDHGA2Q9Y5H1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDHGA2Q9Y5H1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
PCDHGA2Q9Y5H1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDHGA2Q9Y5H1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA2Q9Y5H1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.43■■□□□ 1.66
PCDHGA2Q9Y5H1 AC131212.1-201ENST00000613771 668 ntBASIC25.43■■□□□ 1.66
PCDHGA2Q9Y5H1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
PCDHGA2Q9Y5H1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGA2Q9Y5H1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGA2Q9Y5H1 AC074183.2-201ENST00000623112 922 ntBASIC25.42■■□□□ 1.66
PCDHGA2Q9Y5H1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA2Q9Y5H1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA2Q9Y5H1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA2Q9Y5H1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGA2Q9Y5H1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGA2Q9Y5H1 AC009299.2-201ENST00000482477 511 ntBASIC25.4■■□□□ 1.66
PCDHGA2Q9Y5H1 BHLHE23-202ENST00000612929 1109 ntBASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms