Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGB1Q9Y5G3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGB1Q9Y5G3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
PCDHGB1Q9Y5G3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGB1Q9Y5G3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGB1Q9Y5G3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGB1Q9Y5G3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGB1Q9Y5G3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PCDHGB1Q9Y5G3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.89■■□□□ 1.26
PCDHGB1Q9Y5G3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGB1Q9Y5G3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB1Q9Y5G3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB1Q9Y5G3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PCDHGB1Q9Y5G3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB1Q9Y5G3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGB1Q9Y5G3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGB1Q9Y5G3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGB1Q9Y5G3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB1Q9Y5G3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB1Q9Y5G3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.85■■□□□ 1.25
PCDHGB1Q9Y5G3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGB1Q9Y5G3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB1Q9Y5G3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB1Q9Y5G3 RPS2P35-201ENST00000443417 897 ntBASIC22.84■■□□□ 1.25
PCDHGB1Q9Y5G3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGB1Q9Y5G3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PCDHGB1Q9Y5G3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB1Q9Y5G3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB1Q9Y5G3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDHGB1Q9Y5G3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.83■■□□□ 1.24
PCDHGB1Q9Y5G3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 SETD8P1-201ENST00000623146 1180 ntBASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 AC127502.1-201ENST00000399971 1502 ntBASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDHGB1Q9Y5G3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.81■■□□□ 1.24
PCDHGB1Q9Y5G3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB1Q9Y5G3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDHGB1Q9Y5G3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDHGB1Q9Y5G3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB1Q9Y5G3 AC136428.2-201ENST00000563187 214 ntBASIC22.8■■□□□ 1.24
PCDHGB1Q9Y5G3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB1Q9Y5G3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB1Q9Y5G3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDHGB1Q9Y5G3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 AP002414.2-202ENST00000590929 1450 ntBASIC22.79■■□□□ 1.24
PCDHGB1Q9Y5G3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGB1Q9Y5G3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGB1Q9Y5G3 AC100797.4-201ENST00000631653 1827 ntBASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGB1Q9Y5G3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGB1Q9Y5G3 SUZ12P1-203ENST00000578195 985 ntBASIC22.74■■□□□ 1.23
PCDHGB1Q9Y5G3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGB1Q9Y5G3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGB1Q9Y5G3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGB1Q9Y5G3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGB1Q9Y5G3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms