Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
PCDHGC4Q9Y5F7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGC4Q9Y5F7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGC4Q9Y5F7 AC008813.1-201ENST00000536597 885 ntBASIC25.51■■□□□ 1.67
PCDHGC4Q9Y5F7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGC4Q9Y5F7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PCDHGC4Q9Y5F7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PCDHGC4Q9Y5F7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGC4Q9Y5F7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGC4Q9Y5F7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGC4Q9Y5F7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGC4Q9Y5F7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGC4Q9Y5F7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
PCDHGC4Q9Y5F7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHGC4Q9Y5F7 AC142086.6-201ENST00000621154 1765 ntBASIC25.47■■□□□ 1.67
PCDHGC4Q9Y5F7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.47■■□□□ 1.67
PCDHGC4Q9Y5F7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDHGC4Q9Y5F7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGC4Q9Y5F7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
PCDHGC4Q9Y5F7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
PCDHGC4Q9Y5F7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDHGC4Q9Y5F7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 MIR4449-201ENST00000578365 66 ntBASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDHGC4Q9Y5F7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
PCDHGC4Q9Y5F7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
PCDHGC4Q9Y5F7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PCDHGC4Q9Y5F7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.42■■□□□ 1.66
PCDHGC4Q9Y5F7 AC018358.1-201ENST00000631079 1402 ntBASIC25.42■■□□□ 1.66
PCDHGC4Q9Y5F7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
PCDHGC4Q9Y5F7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC4Q9Y5F7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PCDHGC4Q9Y5F7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
PCDHGC4Q9Y5F7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 MIR219A2-201ENST00000608502 1504 ntBASIC25.4■■□□□ 1.66
PCDHGC4Q9Y5F7 AC148477.6-201ENST00000623746 465 ntBASIC25.39■■□□□ 1.66
PCDHGC4Q9Y5F7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC4Q9Y5F7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
PCDHGC4Q9Y5F7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGC4Q9Y5F7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC4Q9Y5F7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC4Q9Y5F7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC4Q9Y5F7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGC4Q9Y5F7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC4Q9Y5F7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC4Q9Y5F7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGC4Q9Y5F7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PCDHGC4Q9Y5F7 LINC01003-201ENST00000564834 1764 ntBASIC25.36■■□□□ 1.65
PCDHGC4Q9Y5F7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC4Q9Y5F7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC4Q9Y5F7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGC4Q9Y5F7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC4Q9Y5F7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC4Q9Y5F7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGC4Q9Y5F7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
PCDHGC4Q9Y5F7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDHGC4Q9Y5F7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDHGC4Q9Y5F7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PCDHGC4Q9Y5F7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC4Q9Y5F7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.32■■□□□ 1.64
PCDHGC4Q9Y5F7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGC4Q9Y5F7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.31■■□□□ 1.64
PCDHGC4Q9Y5F7 BX255925.1-201ENST00000566954 1854 ntBASIC25.31■■□□□ 1.64
PCDHGC4Q9Y5F7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
PCDHGC4Q9Y5F7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC4Q9Y5F7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGC4Q9Y5F7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.3■■□□□ 1.64
PCDHGC4Q9Y5F7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC4Q9Y5F7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGC4Q9Y5F7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGC4Q9Y5F7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms