Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.4■■□□□ 1.98
PCDHB7Q9Y5E2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
PCDHB7Q9Y5E2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.39■■□□□ 1.98
PCDHB7Q9Y5E2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHB7Q9Y5E2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHB7Q9Y5E2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PCDHB7Q9Y5E2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
PCDHB7Q9Y5E2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHB7Q9Y5E2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PCDHB7Q9Y5E2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.38■■□□□ 1.97
PCDHB7Q9Y5E2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHB7Q9Y5E2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHB7Q9Y5E2 TSPY13P-201ENST00000338964 914 ntBASIC27.37■■□□□ 1.97
PCDHB7Q9Y5E2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PCDHB7Q9Y5E2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.36■■□□□ 1.97
PCDHB7Q9Y5E2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHB7Q9Y5E2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.36■■□□□ 1.97
PCDHB7Q9Y5E2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PCDHB7Q9Y5E2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 AC004987.1-201ENST00000428627 508 ntBASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 AL157400.5-201ENST00000507624 621 ntBASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.35■■□□□ 1.97
PCDHB7Q9Y5E2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PCDHB7Q9Y5E2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB7Q9Y5E2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHB7Q9Y5E2 ATP5G2P3-201ENST00000429083 425 ntBASIC27.33■■□□□ 1.97
PCDHB7Q9Y5E2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.33■■□□□ 1.97
PCDHB7Q9Y5E2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PCDHB7Q9Y5E2 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.31■■□□□ 1.96
PCDHB7Q9Y5E2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
PCDHB7Q9Y5E2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.3■■□□□ 1.96
PCDHB7Q9Y5E2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PCDHB7Q9Y5E2 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.3■■□□□ 1.96
PCDHB7Q9Y5E2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 AC007029.1-201ENST00000604183 313 ntBASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PCDHB7Q9Y5E2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHB7Q9Y5E2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.28■■□□□ 1.96
PCDHB7Q9Y5E2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC27.28■■□□□ 1.96
PCDHB7Q9Y5E2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.28■■□□□ 1.96
PCDHB7Q9Y5E2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 AL359258.2-201ENST00000564063 1566 ntBASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.27■■□□□ 1.96
PCDHB7Q9Y5E2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PCDHB7Q9Y5E2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB7Q9Y5E2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PCDHB7Q9Y5E2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.25■■□□□ 1.95
PCDHB7Q9Y5E2 SMPD5-203ENST00000639008 1464 ntBASIC27.25■■□□□ 1.95
PCDHB7Q9Y5E2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PCDHB7Q9Y5E2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PCDHB7Q9Y5E2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.23■■□□□ 1.95
PCDHB7Q9Y5E2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 AC133552.2-201ENST00000619106 1032 ntBASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.22■■□□□ 1.95
PCDHB7Q9Y5E2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB7Q9Y5E2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB7Q9Y5E2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
PCDHB7Q9Y5E2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PCDHB7Q9Y5E2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHB7Q9Y5E2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 AC009831.1-201ENST00000580420 1582 ntBASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 AC129492.7-201ENST00000622992 756 ntBASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.19■■□□□ 1.94
PCDHB7Q9Y5E2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
PCDHB7Q9Y5E2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
PCDHB7Q9Y5E2 AL592293.1-201ENST00000502889 1188 ntBASIC27.18■■□□□ 1.94
PCDHB7Q9Y5E2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms