Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.87■□□□□ 0.93
KCNIP3Q9Y2W7 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.87■□□□□ 0.93
KCNIP3Q9Y2W7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KCNIP3Q9Y2W7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.86■□□□□ 0.93
KCNIP3Q9Y2W7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNIP3Q9Y2W7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNIP3Q9Y2W7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KCNIP3Q9Y2W7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KCNIP3Q9Y2W7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 AC145676.1-201ENST00000514988 2004 ntBASIC20.85■□□□□ 0.93
KCNIP3Q9Y2W7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNIP3Q9Y2W7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNIP3Q9Y2W7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNIP3Q9Y2W7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
KCNIP3Q9Y2W7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
KCNIP3Q9Y2W7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KCNIP3Q9Y2W7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.83■□□□□ 0.93
KCNIP3Q9Y2W7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNIP3Q9Y2W7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNIP3Q9Y2W7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
KCNIP3Q9Y2W7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KCNIP3Q9Y2W7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
KCNIP3Q9Y2W7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNIP3Q9Y2W7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KCNIP3Q9Y2W7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.82■□□□□ 0.92
KCNIP3Q9Y2W7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KCNIP3Q9Y2W7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
KCNIP3Q9Y2W7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNIP3Q9Y2W7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KCNIP3Q9Y2W7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KCNIP3Q9Y2W7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.78■□□□□ 0.92
KCNIP3Q9Y2W7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KCNIP3Q9Y2W7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KCNIP3Q9Y2W7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP3Q9Y2W7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
KCNIP3Q9Y2W7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP3Q9Y2W7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KCNIP3Q9Y2W7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
KCNIP3Q9Y2W7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KCNIP3Q9Y2W7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KCNIP3Q9Y2W7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.75■□□□□ 0.91
KCNIP3Q9Y2W7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.75■□□□□ 0.91
KCNIP3Q9Y2W7 AC018358.1-201ENST00000631079 1402 ntBASIC20.75■□□□□ 0.91
KCNIP3Q9Y2W7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 AC020928.2-201ENST00000588717 2197 ntBASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
KCNIP3Q9Y2W7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KCNIP3Q9Y2W7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.72■□□□□ 0.91
KCNIP3Q9Y2W7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNIP3Q9Y2W7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.71■□□□□ 0.91
KCNIP3Q9Y2W7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNIP3Q9Y2W7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.71■□□□□ 0.91
KCNIP3Q9Y2W7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KCNIP3Q9Y2W7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KCNIP3Q9Y2W7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.69■□□□□ 0.9
KCNIP3Q9Y2W7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KCNIP3Q9Y2W7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.68■□□□□ 0.9
KCNIP3Q9Y2W7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNIP3Q9Y2W7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCNIP3Q9Y2W7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.68■□□□□ 0.9
KCNIP3Q9Y2W7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
KCNIP3Q9Y2W7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
KCNIP3Q9Y2W7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KCNIP3Q9Y2W7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCNIP3Q9Y2W7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.67■□□□□ 0.9
KCNIP3Q9Y2W7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms