Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC39.54■■■■□ 3.92
CDK11AQ9UQ88 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC39.54■■■■□ 3.92
CDK11AQ9UQ88 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.53■■■■□ 3.92
CDK11AQ9UQ88 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC39.52■■■■□ 3.92
CDK11AQ9UQ88 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC39.52■■■■□ 3.92
CDK11AQ9UQ88 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CDK11AQ9UQ88 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC39.51■■■■□ 3.92
CDK11AQ9UQ88 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
CDK11AQ9UQ88 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC39.51■■■■□ 3.92
CDK11AQ9UQ88 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC39.5■■■■□ 3.91
CDK11AQ9UQ88 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC39.5■■■■□ 3.91
CDK11AQ9UQ88 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
CDK11AQ9UQ88 GUK1-208ENST00000366728 842 ntTSL 2 BASIC39.5■■■■□ 3.91
CDK11AQ9UQ88 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
CDK11AQ9UQ88 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC39.49■■■■□ 3.91
CDK11AQ9UQ88 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC39.49■■■■□ 3.91
CDK11AQ9UQ88 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
CDK11AQ9UQ88 AC007029.1-201ENST00000604183 313 ntBASIC39.48■■■■□ 3.91
CDK11AQ9UQ88 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
CDK11AQ9UQ88 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC39.47■■■■□ 3.91
CDK11AQ9UQ88 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC39.47■■■■□ 3.91
CDK11AQ9UQ88 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC39.47■■■■□ 3.91
CDK11AQ9UQ88 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
CDK11AQ9UQ88 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
CDK11AQ9UQ88 REST-210ENST00000638187 1334 ntTSL 5 BASIC39.46■■■■□ 3.91
CDK11AQ9UQ88 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC39.46■■■■□ 3.91
CDK11AQ9UQ88 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
CDK11AQ9UQ88 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CDK11AQ9UQ88 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
CDK11AQ9UQ88 ST7-AS1-201ENST00000456775 1889 ntBASIC39.45■■■■□ 3.91
CDK11AQ9UQ88 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
CDK11AQ9UQ88 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC39.44■■■■□ 3.9
CDK11AQ9UQ88 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
CDK11AQ9UQ88 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
CDK11AQ9UQ88 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC39.41■■■■□ 3.9
CDK11AQ9UQ88 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
CDK11AQ9UQ88 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
CDK11AQ9UQ88 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC39.39■■■■□ 3.9
CDK11AQ9UQ88 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CDK11AQ9UQ88 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CDK11AQ9UQ88 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC39.37■■■■□ 3.89
CDK11AQ9UQ88 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CDK11AQ9UQ88 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDK11AQ9UQ88 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.36■■■■□ 3.89
CDK11AQ9UQ88 AC129492.7-201ENST00000622992 756 ntBASIC39.35■■■■□ 3.89
CDK11AQ9UQ88 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC39.34■■■■□ 3.89
CDK11AQ9UQ88 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
CDK11AQ9UQ88 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.33■■■■□ 3.89
CDK11AQ9UQ88 AC100797.4-201ENST00000631653 1827 ntBASIC39.33■■■■□ 3.89
CDK11AQ9UQ88 RARRES2P1-201ENST00000474487 481 ntBASIC39.33■■■■□ 3.89
CDK11AQ9UQ88 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC39.33■■■■□ 3.89
CDK11AQ9UQ88 AC009831.1-201ENST00000580420 1582 ntBASIC39.32■■■■□ 3.88
CDK11AQ9UQ88 SMPD5-203ENST00000639008 1464 ntBASIC39.31■■■■□ 3.88
CDK11AQ9UQ88 AC133552.2-201ENST00000619106 1032 ntBASIC39.31■■■■□ 3.88
CDK11AQ9UQ88 AL592293.1-201ENST00000502889 1188 ntBASIC39.3■■■■□ 3.88
CDK11AQ9UQ88 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
CDK11AQ9UQ88 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
CDK11AQ9UQ88 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC39.29■■■■□ 3.88
CDK11AQ9UQ88 AL359258.2-201ENST00000564063 1566 ntBASIC39.29■■■■□ 3.88
CDK11AQ9UQ88 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
CDK11AQ9UQ88 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC39.29■■■■□ 3.88
CDK11AQ9UQ88 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC39.27■■■■□ 3.88
CDK11AQ9UQ88 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.27■■■■□ 3.88
CDK11AQ9UQ88 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.27■■■■□ 3.88
CDK11AQ9UQ88 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
CDK11AQ9UQ88 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
CDK11AQ9UQ88 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
CDK11AQ9UQ88 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC39.26■■■■□ 3.88
CDK11AQ9UQ88 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC39.26■■■■□ 3.87
CDK11AQ9UQ88 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CDK11AQ9UQ88 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC39.25■■■■□ 3.87
CDK11AQ9UQ88 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
CDK11AQ9UQ88 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
CDK11AQ9UQ88 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC39.24■■■■□ 3.87
CDK11AQ9UQ88 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC39.24■■■■□ 3.87
CDK11AQ9UQ88 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC39.23■■■■□ 3.87
CDK11AQ9UQ88 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC39.22■■■■□ 3.87
CDK11AQ9UQ88 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC39.22■■■■□ 3.87
CDK11AQ9UQ88 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC39.22■■■■□ 3.87
CDK11AQ9UQ88 AC025884.2-201ENST00000553429 711 ntBASIC39.21■■■■□ 3.87
CDK11AQ9UQ88 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC39.2■■■■□ 3.87
CDK11AQ9UQ88 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC39.2■■■■□ 3.87
CDK11AQ9UQ88 AC026202.3-201ENST00000600805 1127 ntBASIC39.2■■■■□ 3.87
CDK11AQ9UQ88 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC39.2■■■■□ 3.87
CDK11AQ9UQ88 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC39.2■■■■□ 3.87
CDK11AQ9UQ88 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC39.19■■■■□ 3.86
CDK11AQ9UQ88 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC39.19■■■■□ 3.86
CDK11AQ9UQ88 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
CDK11AQ9UQ88 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
CDK11AQ9UQ88 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC39.19■■■■□ 3.86
CDK11AQ9UQ88 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC39.18■■■■□ 3.86
CDK11AQ9UQ88 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC39.18■■■■□ 3.86
CDK11AQ9UQ88 HES4-204ENST00000484667 667 ntTSL 3 BASIC39.18■■■■□ 3.86
CDK11AQ9UQ88 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC39.17■■■■□ 3.86
CDK11AQ9UQ88 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC39.17■■■■□ 3.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms