Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC39.24■■■■□ 3.87
COL17A1Q9UMD9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
COL17A1Q9UMD9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.24■■■■□ 3.87
COL17A1Q9UMD9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC39.23■■■■□ 3.87
COL17A1Q9UMD9 AL356441.2-201ENST00000443009 864 ntBASIC39.23■■■■□ 3.87
COL17A1Q9UMD9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC39.22■■■■□ 3.87
COL17A1Q9UMD9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC39.22■■■■□ 3.87
COL17A1Q9UMD9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC39.21■■■■□ 3.87
COL17A1Q9UMD9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC39.2■■■■□ 3.87
COL17A1Q9UMD9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
COL17A1Q9UMD9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
COL17A1Q9UMD9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC39.19■■■■□ 3.86
COL17A1Q9UMD9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC39.19■■■■□ 3.86
COL17A1Q9UMD9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.19■■■■□ 3.86
COL17A1Q9UMD9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
COL17A1Q9UMD9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
COL17A1Q9UMD9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC39.18■■■■□ 3.86
COL17A1Q9UMD9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC39.18■■■■□ 3.86
COL17A1Q9UMD9 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC39.18■■■■□ 3.86
COL17A1Q9UMD9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC39.17■■■■□ 3.86
COL17A1Q9UMD9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC39.17■■■■□ 3.86
COL17A1Q9UMD9 PVT1_1.1-201ENST00000615125 194 ntBASIC39.17■■■■□ 3.86
COL17A1Q9UMD9 SPCS2P3-201ENST00000500401 656 ntBASIC39.17■■■■□ 3.86
COL17A1Q9UMD9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC39.16■■■■□ 3.86
COL17A1Q9UMD9 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
COL17A1Q9UMD9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC39.15■■■■□ 3.86
COL17A1Q9UMD9 AC026202.3-201ENST00000600805 1127 ntBASIC39.15■■■■□ 3.86
COL17A1Q9UMD9 AC127502.1-201ENST00000399971 1502 ntBASIC39.15■■■■□ 3.86
COL17A1Q9UMD9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC39.14■■■■□ 3.86
COL17A1Q9UMD9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC39.13■■■■□ 3.86
COL17A1Q9UMD9 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC39.13■■■■□ 3.85
COL17A1Q9UMD9 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
COL17A1Q9UMD9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.85
COL17A1Q9UMD9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC39.13■■■■□ 3.85
COL17A1Q9UMD9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC39.11■■■■□ 3.85
COL17A1Q9UMD9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
COL17A1Q9UMD9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC39.11■■■■□ 3.85
COL17A1Q9UMD9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
COL17A1Q9UMD9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC39.11■■■■□ 3.85
COL17A1Q9UMD9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
COL17A1Q9UMD9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC39.09■■■■□ 3.85
COL17A1Q9UMD9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC39.09■■■■□ 3.85
COL17A1Q9UMD9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC39.09■■■■□ 3.85
COL17A1Q9UMD9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
COL17A1Q9UMD9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
COL17A1Q9UMD9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
COL17A1Q9UMD9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC39.08■■■■□ 3.85
COL17A1Q9UMD9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC39.07■■■■□ 3.85
COL17A1Q9UMD9 AC126177.7-201ENST00000547904 679 ntBASIC39.07■■■■□ 3.85
COL17A1Q9UMD9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC39.07■■■■□ 3.84
COL17A1Q9UMD9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
COL17A1Q9UMD9 AC074183.2-201ENST00000623112 922 ntBASIC39.06■■■■□ 3.84
COL17A1Q9UMD9 AL161658.1-201ENST00000623641 1967 ntBASIC39.06■■■■□ 3.84
COL17A1Q9UMD9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
COL17A1Q9UMD9 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC39.06■■■■□ 3.84
COL17A1Q9UMD9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 REST-210ENST00000638187 1334 ntTSL 5 BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC39.05■■■■□ 3.84
COL17A1Q9UMD9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC39.04■■■■□ 3.84
COL17A1Q9UMD9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
COL17A1Q9UMD9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC39.04■■■■□ 3.84
COL17A1Q9UMD9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
COL17A1Q9UMD9 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
COL17A1Q9UMD9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC39.03■■■■□ 3.84
COL17A1Q9UMD9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC39.03■■■■□ 3.84
COL17A1Q9UMD9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
COL17A1Q9UMD9 AC025884.2-201ENST00000553429 711 ntBASIC39.02■■■■□ 3.84
COL17A1Q9UMD9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
COL17A1Q9UMD9 BHLHE23-202ENST00000612929 1109 ntBASIC39.01■■■■□ 3.84
COL17A1Q9UMD9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC39.01■■■■□ 3.83
COL17A1Q9UMD9 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
COL17A1Q9UMD9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC39■■■■□ 3.83
COL17A1Q9UMD9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC39■■■■□ 3.83
COL17A1Q9UMD9 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC39■■■■□ 3.83
COL17A1Q9UMD9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
COL17A1Q9UMD9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC38.99■■■■□ 3.83
COL17A1Q9UMD9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.99■■■■□ 3.83
COL17A1Q9UMD9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC38.98■■■■□ 3.83
COL17A1Q9UMD9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC38.98■■■■□ 3.83
COL17A1Q9UMD9 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
COL17A1Q9UMD9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
COL17A1Q9UMD9 YBX1P4-201ENST00000392794 808 ntBASIC38.97■■■■□ 3.83
COL17A1Q9UMD9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC38.97■■■■□ 3.83
COL17A1Q9UMD9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC38.97■■■■□ 3.83
COL17A1Q9UMD9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC38.97■■■■□ 3.83
COL17A1Q9UMD9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
COL17A1Q9UMD9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
COL17A1Q9UMD9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
COL17A1Q9UMD9 MIR4508-201ENST00000584178 70 ntBASIC38.95■■■■□ 3.83
COL17A1Q9UMD9 MIR6765-201ENST00000614092 87 ntBASIC38.95■■■■□ 3.83
COL17A1Q9UMD9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
COL17A1Q9UMD9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC38.95■■■■□ 3.83
COL17A1Q9UMD9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
COL17A1Q9UMD9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC38.93■■■■□ 3.82
COL17A1Q9UMD9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
COL17A1Q9UMD9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC38.92■■■■□ 3.82
COL17A1Q9UMD9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC38.92■■■■□ 3.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms