Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.56
POPDC3Q9HBV1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.56
POPDC3Q9HBV1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
POPDC3Q9HBV1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.82■■□□□ 1.56
POPDC3Q9HBV1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.82■■□□□ 1.56
POPDC3Q9HBV1 AC110285.7-201ENST00000624417 1536 ntBASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
POPDC3Q9HBV1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
POPDC3Q9HBV1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
POPDC3Q9HBV1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
POPDC3Q9HBV1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
POPDC3Q9HBV1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
POPDC3Q9HBV1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.79■■□□□ 1.56
POPDC3Q9HBV1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.78■■□□□ 1.56
POPDC3Q9HBV1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.77■■□□□ 1.56
POPDC3Q9HBV1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
POPDC3Q9HBV1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.76■■□□□ 1.55
POPDC3Q9HBV1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
POPDC3Q9HBV1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
POPDC3Q9HBV1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
POPDC3Q9HBV1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.75■■□□□ 1.55
POPDC3Q9HBV1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.75■■□□□ 1.55
POPDC3Q9HBV1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
POPDC3Q9HBV1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
POPDC3Q9HBV1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
POPDC3Q9HBV1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.72■■□□□ 1.55
POPDC3Q9HBV1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
POPDC3Q9HBV1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
POPDC3Q9HBV1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
POPDC3Q9HBV1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.71■■□□□ 1.55
POPDC3Q9HBV1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
POPDC3Q9HBV1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.55
POPDC3Q9HBV1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.7■■□□□ 1.54
POPDC3Q9HBV1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.69■■□□□ 1.54
POPDC3Q9HBV1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
POPDC3Q9HBV1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.69■■□□□ 1.54
POPDC3Q9HBV1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
POPDC3Q9HBV1 RPS2P35-201ENST00000443417 897 ntBASIC24.68■■□□□ 1.54
POPDC3Q9HBV1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
POPDC3Q9HBV1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.67■■□□□ 1.54
POPDC3Q9HBV1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
POPDC3Q9HBV1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.67■■□□□ 1.54
POPDC3Q9HBV1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.67■■□□□ 1.54
POPDC3Q9HBV1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
POPDC3Q9HBV1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.66■■□□□ 1.54
POPDC3Q9HBV1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.65■■□□□ 1.54
POPDC3Q9HBV1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
POPDC3Q9HBV1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
POPDC3Q9HBV1 LINC01971-201ENST00000617888 1048 ntBASIC24.64■■□□□ 1.54
POPDC3Q9HBV1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
POPDC3Q9HBV1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
POPDC3Q9HBV1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
POPDC3Q9HBV1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.61■■□□□ 1.53
POPDC3Q9HBV1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
POPDC3Q9HBV1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
POPDC3Q9HBV1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
POPDC3Q9HBV1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.6■■□□□ 1.53
POPDC3Q9HBV1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
POPDC3Q9HBV1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
POPDC3Q9HBV1 AL449106.1-201ENST00000608517 1980 ntBASIC24.6■■□□□ 1.53
POPDC3Q9HBV1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
POPDC3Q9HBV1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
POPDC3Q9HBV1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
POPDC3Q9HBV1 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.59■■□□□ 1.53
POPDC3Q9HBV1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
POPDC3Q9HBV1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.58■■□□□ 1.53
POPDC3Q9HBV1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 1128.1 ms