Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
S1PR3Q99500 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
S1PR3Q99500 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.61■□□□□ 0.89
S1PR3Q99500 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
S1PR3Q99500 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
S1PR3Q99500 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.61■□□□□ 0.89
S1PR3Q99500 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
S1PR3Q99500 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
S1PR3Q99500 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.6■□□□□ 0.89
S1PR3Q99500 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
S1PR3Q99500 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.6■□□□□ 0.89
S1PR3Q99500 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
S1PR3Q99500 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
S1PR3Q99500 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
S1PR3Q99500 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.6■□□□□ 0.89
S1PR3Q99500 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
S1PR3Q99500 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
S1PR3Q99500 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
S1PR3Q99500 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
S1PR3Q99500 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
S1PR3Q99500 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
S1PR3Q99500 AC018358.1-201ENST00000631079 1402 ntBASIC20.59■□□□□ 0.89
S1PR3Q99500 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
S1PR3Q99500 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
S1PR3Q99500 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
S1PR3Q99500 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
S1PR3Q99500 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
S1PR3Q99500 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
S1PR3Q99500 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
S1PR3Q99500 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
S1PR3Q99500 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.57■□□□□ 0.88
S1PR3Q99500 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
S1PR3Q99500 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.56■□□□□ 0.88
S1PR3Q99500 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
S1PR3Q99500 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
S1PR3Q99500 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
S1PR3Q99500 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
S1PR3Q99500 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.55■□□□□ 0.88
S1PR3Q99500 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.54■□□□□ 0.88
S1PR3Q99500 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
S1PR3Q99500 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
S1PR3Q99500 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
S1PR3Q99500 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
S1PR3Q99500 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
S1PR3Q99500 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
S1PR3Q99500 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
S1PR3Q99500 ABHD17AP4-201ENST00000411545 909 ntBASIC20.53■□□□□ 0.88
S1PR3Q99500 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.53■□□□□ 0.88
S1PR3Q99500 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
S1PR3Q99500 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
S1PR3Q99500 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
S1PR3Q99500 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
S1PR3Q99500 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
S1PR3Q99500 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
S1PR3Q99500 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
S1PR3Q99500 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
S1PR3Q99500 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
S1PR3Q99500 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
S1PR3Q99500 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.51■□□□□ 0.87
S1PR3Q99500 AC110285.7-201ENST00000624417 1536 ntBASIC20.51■□□□□ 0.87
S1PR3Q99500 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.51■□□□□ 0.87
S1PR3Q99500 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
S1PR3Q99500 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
S1PR3Q99500 ZNRF2P2-203ENST00000454624 420 ntBASIC20.5■□□□□ 0.87
S1PR3Q99500 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR3Q99500 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
S1PR3Q99500 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR3Q99500 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR3Q99500 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
S1PR3Q99500 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.48■□□□□ 0.87
S1PR3Q99500 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR3Q99500 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
S1PR3Q99500 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR3Q99500 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.46■□□□□ 0.87
S1PR3Q99500 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR3Q99500 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR3Q99500 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR3Q99500 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR3Q99500 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
S1PR3Q99500 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR3Q99500 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.45■□□□□ 0.86
S1PR3Q99500 LINC01971-201ENST00000617888 1048 ntBASIC20.45■□□□□ 0.86
S1PR3Q99500 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR3Q99500 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR3Q99500 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
S1PR3Q99500 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms