Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SCGB3A1Q96QR1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCGB3A1Q96QR1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCGB3A1Q96QR1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCGB3A1Q96QR1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SCGB3A1Q96QR1 AL031258.1-201ENST00000623562 325 ntBASIC17.85■□□□□ 0.45
SCGB3A1Q96QR1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCGB3A1Q96QR1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCGB3A1Q96QR1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCGB3A1Q96QR1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCGB3A1Q96QR1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCGB3A1Q96QR1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCGB3A1Q96QR1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCGB3A1Q96QR1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCGB3A1Q96QR1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCGB3A1Q96QR1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCGB3A1Q96QR1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCGB3A1Q96QR1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCGB3A1Q96QR1 AC093323.1-202ENST00000635031 2045 ntBASIC17.81■□□□□ 0.44
SCGB3A1Q96QR1 ZNRF2P1-201ENST00000441407 443 ntBASIC17.81■□□□□ 0.44
SCGB3A1Q96QR1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCGB3A1Q96QR1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
SCGB3A1Q96QR1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCGB3A1Q96QR1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SCGB3A1Q96QR1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCGB3A1Q96QR1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCGB3A1Q96QR1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 AC100797.4-201ENST00000631653 1827 ntBASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCGB3A1Q96QR1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCGB3A1Q96QR1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCGB3A1Q96QR1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCGB3A1Q96QR1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCGB3A1Q96QR1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCGB3A1Q96QR1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCGB3A1Q96QR1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 AC127502.1-201ENST00000399971 1502 ntBASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 AP002414.2-202ENST00000590929 1450 ntBASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCGB3A1Q96QR1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCGB3A1Q96QR1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.74■□□□□ 0.43
SCGB3A1Q96QR1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SCGB3A1Q96QR1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SCGB3A1Q96QR1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SCGB3A1Q96QR1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCGB3A1Q96QR1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SCGB3A1Q96QR1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SCGB3A1Q96QR1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SCGB3A1Q96QR1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
SCGB3A1Q96QR1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SCGB3A1Q96QR1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCGB3A1Q96QR1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC17.71■□□□□ 0.43
SCGB3A1Q96QR1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCGB3A1Q96QR1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms