Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DUX4L15-201ENST00000611059 1267 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L23-201ENST00000615195 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L24-201ENST00000617576 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L22-201ENST00000618238 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L20-201ENST00000619712 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L21-201ENST00000622058 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L10-201ENST00000622460 1267 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 DUX4L25-201ENST00000624915 1269 ntBASIC29.86■■■□□ 2.37
NEK1Q96PY6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
NEK1Q96PY6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
NEK1Q96PY6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
NEK1Q96PY6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
NEK1Q96PY6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.83■■■□□ 2.37
NEK1Q96PY6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
NEK1Q96PY6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NEK1Q96PY6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NEK1Q96PY6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
NEK1Q96PY6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NEK1Q96PY6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
NEK1Q96PY6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.82■■■□□ 2.36
NEK1Q96PY6 AL121749.1-202ENST00000609313 2153 ntBASIC29.82■■■□□ 2.36
NEK1Q96PY6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.82■■■□□ 2.36
NEK1Q96PY6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
NEK1Q96PY6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NEK1Q96PY6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
NEK1Q96PY6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
NEK1Q96PY6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
NEK1Q96PY6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.8■■■□□ 2.36
NEK1Q96PY6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
NEK1Q96PY6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
NEK1Q96PY6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
NEK1Q96PY6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
NEK1Q96PY6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
NEK1Q96PY6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
NEK1Q96PY6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
NEK1Q96PY6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
NEK1Q96PY6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NEK1Q96PY6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
NEK1Q96PY6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.77■■■□□ 2.36
NEK1Q96PY6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
NEK1Q96PY6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
NEK1Q96PY6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.76■■■□□ 2.35
NEK1Q96PY6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
NEK1Q96PY6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
NEK1Q96PY6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
NEK1Q96PY6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
NEK1Q96PY6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.74■■■□□ 2.35
NEK1Q96PY6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.74■■■□□ 2.35
NEK1Q96PY6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
NEK1Q96PY6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
NEK1Q96PY6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.73■■■□□ 2.35
NEK1Q96PY6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
NEK1Q96PY6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.72■■■□□ 2.35
NEK1Q96PY6 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
NEK1Q96PY6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
NEK1Q96PY6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.72■■■□□ 2.35
NEK1Q96PY6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
NEK1Q96PY6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NEK1Q96PY6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
NEK1Q96PY6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
NEK1Q96PY6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
NEK1Q96PY6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NEK1Q96PY6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.35
NEK1Q96PY6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.7■■■□□ 2.35
NEK1Q96PY6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
NEK1Q96PY6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.7■■■□□ 2.35
NEK1Q96PY6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
NEK1Q96PY6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
NEK1Q96PY6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.7■■■□□ 2.34
NEK1Q96PY6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
NEK1Q96PY6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.69■■■□□ 2.34
NEK1Q96PY6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
NEK1Q96PY6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NEK1Q96PY6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
NEK1Q96PY6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
NEK1Q96PY6 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.69■■■□□ 2.34
NEK1Q96PY6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
NEK1Q96PY6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
NEK1Q96PY6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
NEK1Q96PY6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
NEK1Q96PY6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.67■■■□□ 2.34
NEK1Q96PY6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.67■■■□□ 2.34
NEK1Q96PY6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
NEK1Q96PY6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NEK1Q96PY6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
NEK1Q96PY6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.66■■■□□ 2.34
NEK1Q96PY6 CR559946.2-201ENST00000623684 991 ntBASIC29.66■■■□□ 2.34
NEK1Q96PY6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NEK1Q96PY6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
NEK1Q96PY6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.65■■■□□ 2.34
NEK1Q96PY6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
NEK1Q96PY6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
NEK1Q96PY6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
NEK1Q96PY6 MIR7108-201ENST00000614319 87 ntBASIC29.64■■■□□ 2.34
NEK1Q96PY6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
NEK1Q96PY6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
NEK1Q96PY6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.63■■■□□ 2.33
NEK1Q96PY6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.63■■■□□ 2.33
NEK1Q96PY6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
NEK1Q96PY6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms