Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.76■■□□□ 1.07
SEH1LQ96EE3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SEH1LQ96EE3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 AC021231.2-201ENST00000594613 730 ntBASIC21.73■■□□□ 1.07
SEH1LQ96EE3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
SEH1LQ96EE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SEH1LQ96EE3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEH1LQ96EE3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEH1LQ96EE3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 DUX4L29-201ENST00000425409 679 ntBASIC21.69■■□□□ 1.06
SEH1LQ96EE3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEH1LQ96EE3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEH1LQ96EE3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.67■■□□□ 1.06
SEH1LQ96EE3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SEH1LQ96EE3 WHAMMP2-203ENST00000563942 1603 ntBASIC21.66■■□□□ 1.06
SEH1LQ96EE3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 AC135983.2-203ENST00000454486 1613 ntBASIC21.65■■□□□ 1.06
SEH1LQ96EE3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SEH1LQ96EE3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SEH1LQ96EE3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SEH1LQ96EE3 AC100797.4-201ENST00000631653 1827 ntBASIC21.64■■□□□ 1.05
SEH1LQ96EE3 LINC00273-201ENST00000539813 1452 ntBASIC21.64■■□□□ 1.05
SEH1LQ96EE3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
SEH1LQ96EE3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SEH1LQ96EE3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SEH1LQ96EE3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 AC091060.1-201ENST00000623524 1766 ntBASIC21.6■■□□□ 1.05
SEH1LQ96EE3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SEH1LQ96EE3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SEH1LQ96EE3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms