Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
FOXRED1Q96CU9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXRED1Q96CU9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXRED1Q96CU9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.72■■□□□ 1.07
FOXRED1Q96CU9 AC005559.1-201ENST00000589661 871 ntBASIC21.72■■□□□ 1.07
FOXRED1Q96CU9 AL449106.1-201ENST00000608517 1980 ntBASIC21.71■■□□□ 1.07
FOXRED1Q96CU9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXRED1Q96CU9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXRED1Q96CU9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXRED1Q96CU9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXRED1Q96CU9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXRED1Q96CU9 AC135983.2-203ENST00000454486 1613 ntBASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
FOXRED1Q96CU9 AL162393.1-201ENST00000437852 946 ntBASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXRED1Q96CU9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 AC091060.1-201ENST00000623524 1766 ntBASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXRED1Q96CU9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXRED1Q96CU9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXRED1Q96CU9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXRED1Q96CU9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FOXRED1Q96CU9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXRED1Q96CU9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.65■■□□□ 1.06
FOXRED1Q96CU9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXRED1Q96CU9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXRED1Q96CU9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXRED1Q96CU9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.64■■□□□ 1.05
FOXRED1Q96CU9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FOXRED1Q96CU9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FOXRED1Q96CU9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FOXRED1Q96CU9 AC145676.1-201ENST00000514988 2004 ntBASIC21.62■■□□□ 1.05
FOXRED1Q96CU9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 DUX4L28-201ENST00000623687 678 ntBASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
FOXRED1Q96CU9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 RPS2P35-201ENST00000443417 897 ntBASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 AC108673.1-201ENST00000510422 1159 ntBASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FOXRED1Q96CU9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXRED1Q96CU9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXRED1Q96CU9 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXRED1Q96CU9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FOXRED1Q96CU9 WHAMMP2-203ENST00000563942 1603 ntBASIC21.58■■□□□ 1.05
FOXRED1Q96CU9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXRED1Q96CU9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXRED1Q96CU9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
FOXRED1Q96CU9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXRED1Q96CU9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
FOXRED1Q96CU9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXRED1Q96CU9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
FOXRED1Q96CU9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXRED1Q96CU9 LINC00273-201ENST00000539813 1452 ntBASIC21.56■■□□□ 1.04
FOXRED1Q96CU9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXRED1Q96CU9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXRED1Q96CU9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms