Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22■■□□□ 1.11
LINC01560Q8TB33 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
LINC01560Q8TB33 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINC01560Q8TB33 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINC01560Q8TB33 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
LINC01560Q8TB33 AP004833.2-201ENST00000532228 1454 ntBASIC21.98■■□□□ 1.11
LINC01560Q8TB33 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
LINC01560Q8TB33 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LINC01560Q8TB33 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINC01560Q8TB33 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.97■■□□□ 1.11
LINC01560Q8TB33 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LINC01560Q8TB33 AC004987.1-201ENST00000428627 508 ntBASIC21.97■■□□□ 1.11
LINC01560Q8TB33 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.97■■□□□ 1.11
LINC01560Q8TB33 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC01560Q8TB33 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINC01560Q8TB33 TSPY13P-201ENST00000338964 914 ntBASIC21.96■■□□□ 1.11
LINC01560Q8TB33 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC01560Q8TB33 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.96■■□□□ 1.11
LINC01560Q8TB33 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.95■■□□□ 1.1
LINC01560Q8TB33 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINC01560Q8TB33 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LINC01560Q8TB33 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 ATP5G2P3-201ENST00000429083 425 ntBASIC21.94■■□□□ 1.1
LINC01560Q8TB33 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.94■■□□□ 1.1
LINC01560Q8TB33 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01560Q8TB33 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.93■■□□□ 1.1
LINC01560Q8TB33 AL157400.5-201ENST00000507624 621 ntBASIC21.93■■□□□ 1.1
LINC01560Q8TB33 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01560Q8TB33 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINC01560Q8TB33 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01560Q8TB33 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINC01560Q8TB33 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01560Q8TB33 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINC01560Q8TB33 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.91■■□□□ 1.1
LINC01560Q8TB33 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC01560Q8TB33 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LINC01560Q8TB33 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.9■■□□□ 1.1
LINC01560Q8TB33 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINC01560Q8TB33 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.89■■□□□ 1.09
LINC01560Q8TB33 AL359258.2-201ENST00000564063 1566 ntBASIC21.89■■□□□ 1.09
LINC01560Q8TB33 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
LINC01560Q8TB33 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.88■■□□□ 1.09
LINC01560Q8TB33 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 AC007029.1-201ENST00000604183 313 ntBASIC21.87■■□□□ 1.09
LINC01560Q8TB33 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LINC01560Q8TB33 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LINC01560Q8TB33 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LINC01560Q8TB33 AC133552.2-201ENST00000619106 1032 ntBASIC21.85■■□□□ 1.09
LINC01560Q8TB33 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01560Q8TB33 SMPD5-203ENST00000639008 1464 ntBASIC21.84■■□□□ 1.09
LINC01560Q8TB33 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01560Q8TB33 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
LINC01560Q8TB33 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC01560Q8TB33 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.84■■□□□ 1.09
LINC01560Q8TB33 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LINC01560Q8TB33 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC01560Q8TB33 AC009831.1-201ENST00000580420 1582 ntBASIC21.82■■□□□ 1.08
LINC01560Q8TB33 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.82■■□□□ 1.08
LINC01560Q8TB33 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01560Q8TB33 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LINC01560Q8TB33 AL592293.1-201ENST00000502889 1188 ntBASIC21.82■■□□□ 1.08
LINC01560Q8TB33 DUX4L18-201ENST00000553347 1267 ntBASIC21.82■■□□□ 1.08
LINC01560Q8TB33 AC129492.7-201ENST00000622992 756 ntBASIC21.82■■□□□ 1.08
LINC01560Q8TB33 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.82■■□□□ 1.08
LINC01560Q8TB33 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LINC01560Q8TB33 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.81■■□□□ 1.08
LINC01560Q8TB33 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms