Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.7■■■■□ 3.15
COL22A1Q8NFW1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
COL22A1Q8NFW1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
COL22A1Q8NFW1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC34.7■■■■□ 3.14
COL22A1Q8NFW1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
COL22A1Q8NFW1 DUX4L9-201ENST00000449051 1259 ntBASIC34.69■■■■□ 3.14
COL22A1Q8NFW1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
COL22A1Q8NFW1 AC131212.1-201ENST00000613771 668 ntBASIC34.69■■■■□ 3.14
COL22A1Q8NFW1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC34.68■■■■□ 3.14
COL22A1Q8NFW1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
COL22A1Q8NFW1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
COL22A1Q8NFW1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.67■■■■□ 3.14
COL22A1Q8NFW1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
COL22A1Q8NFW1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC34.67■■■■□ 3.14
COL22A1Q8NFW1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
COL22A1Q8NFW1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
COL22A1Q8NFW1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
COL22A1Q8NFW1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC34.66■■■■□ 3.14
COL22A1Q8NFW1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC34.66■■■■□ 3.14
COL22A1Q8NFW1 GUSBP5-201ENST00000418136 578 ntBASIC34.64■■■■□ 3.14
COL22A1Q8NFW1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC34.64■■■■□ 3.14
COL22A1Q8NFW1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
COL22A1Q8NFW1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC34.64■■■■□ 3.14
COL22A1Q8NFW1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC34.63■■■■□ 3.13
COL22A1Q8NFW1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC34.63■■■■□ 3.13
COL22A1Q8NFW1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
COL22A1Q8NFW1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
COL22A1Q8NFW1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
COL22A1Q8NFW1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
COL22A1Q8NFW1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC34.62■■■■□ 3.13
COL22A1Q8NFW1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC34.62■■■■□ 3.13
COL22A1Q8NFW1 HES6-204ENST00000409182 863 ntTSL 2 BASIC34.61■■■■□ 3.13
COL22A1Q8NFW1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL22A1Q8NFW1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL22A1Q8NFW1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
COL22A1Q8NFW1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
COL22A1Q8NFW1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 AC025884.2-201ENST00000553429 711 ntBASIC34.59■■■■□ 3.13
COL22A1Q8NFW1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL22A1Q8NFW1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
COL22A1Q8NFW1 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
COL22A1Q8NFW1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC34.58■■■■□ 3.13
COL22A1Q8NFW1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
COL22A1Q8NFW1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL22A1Q8NFW1 AC026202.3-201ENST00000600805 1127 ntBASIC34.57■■■■□ 3.12
COL22A1Q8NFW1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC34.57■■■■□ 3.12
COL22A1Q8NFW1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
COL22A1Q8NFW1 SPCS2P3-201ENST00000500401 656 ntBASIC34.55■■■■□ 3.12
COL22A1Q8NFW1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC34.55■■■■□ 3.12
COL22A1Q8NFW1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC34.55■■■■□ 3.12
COL22A1Q8NFW1 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC34.55■■■■□ 3.12
COL22A1Q8NFW1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC34.54■■■■□ 3.12
COL22A1Q8NFW1 THA1P-201ENST00000590384 1145 ntBASIC34.54■■■■□ 3.12
COL22A1Q8NFW1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 AC010980.1-201ENST00000587192 1142 ntBASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 KRT8P33-201ENST00000508125 1423 ntBASIC34.53■■■■□ 3.12
COL22A1Q8NFW1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC34.52■■■■□ 3.12
COL22A1Q8NFW1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC34.52■■■■□ 3.12
COL22A1Q8NFW1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.52■■■■□ 3.12
COL22A1Q8NFW1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC34.52■■■■□ 3.12
COL22A1Q8NFW1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.11
COL22A1Q8NFW1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 RP9P-202ENST00000450133 1212 ntBASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 RAP2CP1-202ENST00000605179 643 ntBASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.5■■■■□ 3.11
COL22A1Q8NFW1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 OR2A1-AS1-204ENST00000470435 602 ntBASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.49■■■■□ 3.11
COL22A1Q8NFW1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC34.47■■■■□ 3.11
COL22A1Q8NFW1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC34.46■■■■□ 3.11
COL22A1Q8NFW1 AC103834.1-201ENST00000520383 144 ntBASIC34.46■■■■□ 3.11
COL22A1Q8NFW1 AC074183.2-201ENST00000623112 922 ntBASIC34.46■■■■□ 3.11
COL22A1Q8NFW1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
COL22A1Q8NFW1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.45■■■■□ 3.11
COL22A1Q8NFW1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC34.45■■■■□ 3.11
COL22A1Q8NFW1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC34.45■■■■□ 3.11
COL22A1Q8NFW1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC34.45■■■■□ 3.11
COL22A1Q8NFW1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC34.45■■■■□ 3.1
COL22A1Q8NFW1 MIR4508-201ENST00000584178 70 ntBASIC34.44■■■■□ 3.1
COL22A1Q8NFW1 SMPD5-203ENST00000639008 1464 ntBASIC34.44■■■■□ 3.1
COL22A1Q8NFW1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC34.44■■■■□ 3.1
COL22A1Q8NFW1 PVT1_1.1-201ENST00000615125 194 ntBASIC34.44■■■■□ 3.1
COL22A1Q8NFW1 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC34.43■■■■□ 3.1
COL22A1Q8NFW1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC34.43■■■■□ 3.1
COL22A1Q8NFW1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC34.43■■■■□ 3.1
COL22A1Q8NFW1 AC093536.1-201ENST00000569153 554 ntBASIC34.43■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms