Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SPTSSBQ8NFR3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SPTSSBQ8NFR3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPTSSBQ8NFR3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPTSSBQ8NFR3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC13.92□□□□□ -0.18
SPTSSBQ8NFR3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SPTSSBQ8NFR3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SPTSSBQ8NFR3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SPTSSBQ8NFR3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SPTSSBQ8NFR3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SPTSSBQ8NFR3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SPTSSBQ8NFR3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SPTSSBQ8NFR3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC13.84□□□□□ -0.19
SPTSSBQ8NFR3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms