Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
SHCBP1Q8NEM2 ATP5G2P3-201ENST00000429083 425 ntBASIC28.99■■■□□ 2.23
SHCBP1Q8NEM2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SHCBP1Q8NEM2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SHCBP1Q8NEM2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.98■■■□□ 2.23
SHCBP1Q8NEM2 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.98■■■□□ 2.23
SHCBP1Q8NEM2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SHCBP1Q8NEM2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SHCBP1Q8NEM2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SHCBP1Q8NEM2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.97■■■□□ 2.23
SHCBP1Q8NEM2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.97■■■□□ 2.23
SHCBP1Q8NEM2 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.97■■■□□ 2.23
SHCBP1Q8NEM2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SHCBP1Q8NEM2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SHCBP1Q8NEM2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
SHCBP1Q8NEM2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SHCBP1Q8NEM2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.95■■■□□ 2.23
SHCBP1Q8NEM2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.95■■■□□ 2.22
SHCBP1Q8NEM2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.94■■■□□ 2.22
SHCBP1Q8NEM2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SHCBP1Q8NEM2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.94■■■□□ 2.22
SHCBP1Q8NEM2 AC007029.1-201ENST00000604183 313 ntBASIC28.94■■■□□ 2.22
SHCBP1Q8NEM2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHCBP1Q8NEM2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.93■■■□□ 2.22
SHCBP1Q8NEM2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHCBP1Q8NEM2 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.93■■■□□ 2.22
SHCBP1Q8NEM2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
SHCBP1Q8NEM2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SHCBP1Q8NEM2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.92■■■□□ 2.22
SHCBP1Q8NEM2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
SHCBP1Q8NEM2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.92■■■□□ 2.22
SHCBP1Q8NEM2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 AC100797.4-201ENST00000631653 1827 ntBASIC28.91■■■□□ 2.22
SHCBP1Q8NEM2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.9■■■□□ 2.22
SHCBP1Q8NEM2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.9■■■□□ 2.22
SHCBP1Q8NEM2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.9■■■□□ 2.22
SHCBP1Q8NEM2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.89■■■□□ 2.22
SHCBP1Q8NEM2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SHCBP1Q8NEM2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
SHCBP1Q8NEM2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
SHCBP1Q8NEM2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
SHCBP1Q8NEM2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
SHCBP1Q8NEM2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SHCBP1Q8NEM2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
SHCBP1Q8NEM2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.85■■■□□ 2.21
SHCBP1Q8NEM2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SHCBP1Q8NEM2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.85■■■□□ 2.21
SHCBP1Q8NEM2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
SHCBP1Q8NEM2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 AC129492.7-201ENST00000622992 756 ntBASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 SMPD5-203ENST00000639008 1464 ntBASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 AL359258.2-201ENST00000564063 1566 ntBASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 AC009831.1-201ENST00000580420 1582 ntBASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
SHCBP1Q8NEM2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SHCBP1Q8NEM2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SHCBP1Q8NEM2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SHCBP1Q8NEM2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SHCBP1Q8NEM2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SHCBP1Q8NEM2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SHCBP1Q8NEM2 AC133552.2-201ENST00000619106 1032 ntBASIC28.81■■■□□ 2.2
SHCBP1Q8NEM2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
SHCBP1Q8NEM2 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
SHCBP1Q8NEM2 AL592293.1-201ENST00000502889 1188 ntBASIC28.8■■■□□ 2.2
SHCBP1Q8NEM2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SHCBP1Q8NEM2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.8■■■□□ 2.2
SHCBP1Q8NEM2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHCBP1Q8NEM2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SHCBP1Q8NEM2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.79■■■□□ 2.2
SHCBP1Q8NEM2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.79■■■□□ 2.2
SHCBP1Q8NEM2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.78■■■□□ 2.2
SHCBP1Q8NEM2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
SHCBP1Q8NEM2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SHCBP1Q8NEM2 AC025884.2-201ENST00000553429 711 ntBASIC28.78■■■□□ 2.2
SHCBP1Q8NEM2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
SHCBP1Q8NEM2 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.77■■■□□ 2.2
SHCBP1Q8NEM2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SHCBP1Q8NEM2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SHCBP1Q8NEM2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
SHCBP1Q8NEM2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SHCBP1Q8NEM2 RARRES2P1-201ENST00000474487 481 ntBASIC28.76■■■□□ 2.19
SHCBP1Q8NEM2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SHCBP1Q8NEM2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SHCBP1Q8NEM2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.75■■■□□ 2.19
SHCBP1Q8NEM2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SHCBP1Q8NEM2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.74■■■□□ 2.19
SHCBP1Q8NEM2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC28.74■■■□□ 2.19
SHCBP1Q8NEM2 AC026202.3-201ENST00000600805 1127 ntBASIC28.74■■■□□ 2.19
SHCBP1Q8NEM2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SHCBP1Q8NEM2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms