Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
C11orf42Q8N5U0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 AC135731.1-201ENST00000569415 2548 ntBASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
C11orf42Q8N5U0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 MIR639-201ENST00000384974 98 ntBASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C11orf42Q8N5U0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
C11orf42Q8N5U0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
C11orf42Q8N5U0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
C11orf42Q8N5U0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf42Q8N5U0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
C11orf42Q8N5U0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.76■□□□□ 0.91
C11orf42Q8N5U0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf42Q8N5U0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C11orf42Q8N5U0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.75■□□□□ 0.91
C11orf42Q8N5U0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
C11orf42Q8N5U0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C11orf42Q8N5U0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.74■□□□□ 0.91
C11orf42Q8N5U0 AC008813.1-201ENST00000536597 885 ntBASIC20.73■□□□□ 0.91
C11orf42Q8N5U0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
C11orf42Q8N5U0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.73■□□□□ 0.91
C11orf42Q8N5U0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
C11orf42Q8N5U0 HLA-V-202ENST00000446817 847 ntBASIC20.72■□□□□ 0.91
C11orf42Q8N5U0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C11orf42Q8N5U0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
C11orf42Q8N5U0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.71■□□□□ 0.91
C11orf42Q8N5U0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf42Q8N5U0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf42Q8N5U0 AC142086.6-201ENST00000621154 1765 ntBASIC20.71■□□□□ 0.91
C11orf42Q8N5U0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C11orf42Q8N5U0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf42Q8N5U0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf42Q8N5U0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf42Q8N5U0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
C11orf42Q8N5U0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
C11orf42Q8N5U0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.69■□□□□ 0.9
C11orf42Q8N5U0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C11orf42Q8N5U0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C11orf42Q8N5U0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.68■□□□□ 0.9
C11orf42Q8N5U0 AC018358.1-201ENST00000631079 1402 ntBASIC20.68■□□□□ 0.9
C11orf42Q8N5U0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 MIR4449-201ENST00000578365 66 ntBASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
C11orf42Q8N5U0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 AC148477.6-201ENST00000623746 465 ntBASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
C11orf42Q8N5U0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
C11orf42Q8N5U0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
C11orf42Q8N5U0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
C11orf42Q8N5U0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.65■□□□□ 0.9
C11orf42Q8N5U0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
C11orf42Q8N5U0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf42Q8N5U0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
C11orf42Q8N5U0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf42Q8N5U0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C11orf42Q8N5U0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf42Q8N5U0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms