Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST3H2BBQ8N257 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HIST3H2BBQ8N257 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HIST3H2BBQ8N257 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 AC068473.5-201ENST00000616428 2072 ntBASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
HIST3H2BBQ8N257 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H2BBQ8N257 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H2BBQ8N257 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HIST3H2BBQ8N257 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H2BBQ8N257 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.05■□□□□ 0.64
HIST3H2BBQ8N257 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H2BBQ8N257 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H2BBQ8N257 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HIST3H2BBQ8N257 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HIST3H2BBQ8N257 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HIST3H2BBQ8N257 LINC01003-201ENST00000564834 1764 ntBASIC19.04■□□□□ 0.64
HIST3H2BBQ8N257 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H2BBQ8N257 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H2BBQ8N257 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.03■□□□□ 0.64
HIST3H2BBQ8N257 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H2BBQ8N257 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HIST3H2BBQ8N257 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.02■□□□□ 0.64
HIST3H2BBQ8N257 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
HIST3H2BBQ8N257 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HIST3H2BBQ8N257 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
HIST3H2BBQ8N257 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST3H2BBQ8N257 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HIST3H2BBQ8N257 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19■□□□□ 0.63
HIST3H2BBQ8N257 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.99■□□□□ 0.63
HIST3H2BBQ8N257 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HIST3H2BBQ8N257 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 ERN1-208ENST00000606895 2068 ntBASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HIST3H2BBQ8N257 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST3H2BBQ8N257 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST3H2BBQ8N257 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIST3H2BBQ8N257 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.96■□□□□ 0.63
HIST3H2BBQ8N257 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIST3H2BBQ8N257 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
HIST3H2BBQ8N257 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST3H2BBQ8N257 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST3H2BBQ8N257 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIST3H2BBQ8N257 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST3H2BBQ8N257 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIST3H2BBQ8N257 DUSP8P4-201ENST00000399538 1761 ntBASIC18.93■□□□□ 0.62
HIST3H2BBQ8N257 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIST3H2BBQ8N257 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
HIST3H2BBQ8N257 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIST3H2BBQ8N257 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HIST3H2BBQ8N257 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.91■□□□□ 0.62
HIST3H2BBQ8N257 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HIST3H2BBQ8N257 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms