Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
LRRTM1Q86UE6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRTM1Q86UE6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRTM1Q86UE6 AC135983.2-203ENST00000454486 1613 ntBASIC21.8■■□□□ 1.08
LRRTM1Q86UE6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRTM1Q86UE6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM1Q86UE6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRTM1Q86UE6 AC145676.1-201ENST00000514988 2004 ntBASIC21.8■■□□□ 1.08
LRRTM1Q86UE6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 AC136428.2-201ENST00000563187 214 ntBASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRRTM1Q86UE6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.78■■□□□ 1.08
LRRTM1Q86UE6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM1Q86UE6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRTM1Q86UE6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LRRTM1Q86UE6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LRRTM1Q86UE6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRTM1Q86UE6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRTM1Q86UE6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRTM1Q86UE6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.76■■□□□ 1.07
LRRTM1Q86UE6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRRTM1Q86UE6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LRRTM1Q86UE6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LRRTM1Q86UE6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LRRTM1Q86UE6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRTM1Q86UE6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.74■■□□□ 1.07
LRRTM1Q86UE6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LRRTM1Q86UE6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.74■■□□□ 1.07
LRRTM1Q86UE6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.73■■□□□ 1.07
LRRTM1Q86UE6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM1Q86UE6 AC020928.2-201ENST00000588717 2197 ntBASIC21.73■■□□□ 1.07
LRRTM1Q86UE6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRTM1Q86UE6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 MIR762-201ENST00000390236 83 ntBASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRTM1Q86UE6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
LRRTM1Q86UE6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRTM1Q86UE6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRTM1Q86UE6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.71■■□□□ 1.07
LRRTM1Q86UE6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.71■■□□□ 1.07
LRRTM1Q86UE6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LRRTM1Q86UE6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 AC097358.2-201ENST00000607541 1159 ntBASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
LRRTM1Q86UE6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRTM1Q86UE6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LRRTM1Q86UE6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.69■■□□□ 1.06
LRRTM1Q86UE6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRTM1Q86UE6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRRTM1Q86UE6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRRTM1Q86UE6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRRTM1Q86UE6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.67■■□□□ 1.06
LRRTM1Q86UE6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRRTM1Q86UE6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM1Q86UE6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM1Q86UE6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM1Q86UE6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRTM1Q86UE6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.66■■□□□ 1.06
LRRTM1Q86UE6 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LRRTM1Q86UE6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRTM1Q86UE6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.64■■□□□ 1.05
LRRTM1Q86UE6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
LRRTM1Q86UE6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRTM1Q86UE6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRRTM1Q86UE6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRTM1Q86UE6 AC092803.2-201ENST00000564287 1899 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms