Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZNF546Q86UE3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNF546Q86UE3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF546Q86UE3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
ZNF546Q86UE3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNF546Q86UE3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNF546Q86UE3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF546Q86UE3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNF546Q86UE3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF546Q86UE3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF546Q86UE3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF546Q86UE3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ZNF546Q86UE3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF546Q86UE3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNF546Q86UE3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF546Q86UE3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF546Q86UE3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF546Q86UE3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
ZNF546Q86UE3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF546Q86UE3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF546Q86UE3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.77■□□□□ 0.92
ZNF546Q86UE3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF546Q86UE3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF546Q86UE3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF546Q86UE3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ZNF546Q86UE3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
ZNF546Q86UE3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF546Q86UE3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF546Q86UE3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF546Q86UE3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF546Q86UE3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF546Q86UE3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF546Q86UE3 AL031258.1-201ENST00000623562 325 ntBASIC20.73■□□□□ 0.91
ZNF546Q86UE3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF546Q86UE3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF546Q86UE3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF546Q86UE3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF546Q86UE3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ZNF546Q86UE3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF546Q86UE3 DUSP8P4-201ENST00000399538 1761 ntBASIC20.72■□□□□ 0.91
ZNF546Q86UE3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF546Q86UE3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF546Q86UE3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
ZNF546Q86UE3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ZNF546Q86UE3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF546Q86UE3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ZNF546Q86UE3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF546Q86UE3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF546Q86UE3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF546Q86UE3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF546Q86UE3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF546Q86UE3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF546Q86UE3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF546Q86UE3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF546Q86UE3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF546Q86UE3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.66■□□□□ 0.9
ZNF546Q86UE3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ZNF546Q86UE3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF546Q86UE3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF546Q86UE3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF546Q86UE3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF546Q86UE3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF546Q86UE3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF546Q86UE3 AC092803.2-201ENST00000564287 1899 ntBASIC20.64■□□□□ 0.9
ZNF546Q86UE3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.64■□□□□ 0.9
ZNF546Q86UE3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF546Q86UE3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF546Q86UE3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.63■□□□□ 0.89
ZNF546Q86UE3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF546Q86UE3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF546Q86UE3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.62■□□□□ 0.89
ZNF546Q86UE3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF546Q86UE3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF546Q86UE3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms