Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SHFQ7M4L6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.59■■□□□ 1.21
SHFQ7M4L6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SHFQ7M4L6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.59■■□□□ 1.21
SHFQ7M4L6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.59■■□□□ 1.21
SHFQ7M4L6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHFQ7M4L6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHFQ7M4L6 AC091060.1-201ENST00000623524 1766 ntBASIC22.58■■□□□ 1.21
SHFQ7M4L6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC22.58■■□□□ 1.21
SHFQ7M4L6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SHFQ7M4L6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SHFQ7M4L6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
SHFQ7M4L6 SUZ12P1-203ENST00000578195 985 ntBASIC22.57■■□□□ 1.2
SHFQ7M4L6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.57■■□□□ 1.2
SHFQ7M4L6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SHFQ7M4L6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.56■■□□□ 1.2
SHFQ7M4L6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.56■■□□□ 1.2
SHFQ7M4L6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.56■■□□□ 1.2
SHFQ7M4L6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SHFQ7M4L6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.56■■□□□ 1.2
SHFQ7M4L6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.55■■□□□ 1.2
SHFQ7M4L6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SHFQ7M4L6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SHFQ7M4L6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SHFQ7M4L6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SHFQ7M4L6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHFQ7M4L6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHFQ7M4L6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
SHFQ7M4L6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHFQ7M4L6 AC108673.1-201ENST00000510422 1159 ntBASIC22.54■■□□□ 1.2
SHFQ7M4L6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SHFQ7M4L6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SHFQ7M4L6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHFQ7M4L6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHFQ7M4L6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHFQ7M4L6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SHFQ7M4L6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHFQ7M4L6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHFQ7M4L6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHFQ7M4L6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SHFQ7M4L6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SHFQ7M4L6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHFQ7M4L6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SHFQ7M4L6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.51■■□□□ 1.19
SHFQ7M4L6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.51■■□□□ 1.19
SHFQ7M4L6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SHFQ7M4L6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
SHFQ7M4L6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
SHFQ7M4L6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHFQ7M4L6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHFQ7M4L6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SHFQ7M4L6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SHFQ7M4L6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHFQ7M4L6 AC018358.1-201ENST00000631079 1402 ntBASIC22.48■■□□□ 1.19
SHFQ7M4L6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHFQ7M4L6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SHFQ7M4L6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.48■■□□□ 1.19
SHFQ7M4L6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.47■■□□□ 1.19
SHFQ7M4L6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SHFQ7M4L6 AC135983.2-203ENST00000454486 1613 ntBASIC22.46■■□□□ 1.19
SHFQ7M4L6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
SHFQ7M4L6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHFQ7M4L6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHFQ7M4L6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SHFQ7M4L6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.46■■□□□ 1.19
SHFQ7M4L6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SHFQ7M4L6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHFQ7M4L6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SHFQ7M4L6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
SHFQ7M4L6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHFQ7M4L6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
SHFQ7M4L6 WHAMMP2-203ENST00000563942 1603 ntBASIC22.45■■□□□ 1.18
SHFQ7M4L6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHFQ7M4L6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SHFQ7M4L6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHFQ7M4L6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.44■■□□□ 1.18
SHFQ7M4L6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHFQ7M4L6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHFQ7M4L6 MIR3665-201ENST00000578708 105 ntBASIC22.43■■□□□ 1.18
SHFQ7M4L6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SHFQ7M4L6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.43■■□□□ 1.18
SHFQ7M4L6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
SHFQ7M4L6 DUX4L28-201ENST00000623687 678 ntBASIC22.42■■□□□ 1.18
SHFQ7M4L6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHFQ7M4L6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHFQ7M4L6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
SHFQ7M4L6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.41■■□□□ 1.18
SHFQ7M4L6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms