Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf139Q6ZV77 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C9orf139Q6ZV77 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.41■□□□□ 0.86
C9orf139Q6ZV77 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C9orf139Q6ZV77 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C9orf139Q6ZV77 AC012354.3-201ENST00000623734 483 ntBASIC20.4■□□□□ 0.86
C9orf139Q6ZV77 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.39■□□□□ 0.86
C9orf139Q6ZV77 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.39■□□□□ 0.85
C9orf139Q6ZV77 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf139Q6ZV77 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
C9orf139Q6ZV77 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
C9orf139Q6ZV77 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.38■□□□□ 0.85
C9orf139Q6ZV77 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 AC100797.4-201ENST00000631653 1827 ntBASIC20.37■□□□□ 0.85
C9orf139Q6ZV77 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf139Q6ZV77 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.36■□□□□ 0.85
C9orf139Q6ZV77 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C9orf139Q6ZV77 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.36■□□□□ 0.85
C9orf139Q6ZV77 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.36■□□□□ 0.85
C9orf139Q6ZV77 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C9orf139Q6ZV77 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
C9orf139Q6ZV77 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C9orf139Q6ZV77 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C9orf139Q6ZV77 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.34■□□□□ 0.85
C9orf139Q6ZV77 U85056.1-201ENST00000616429 682 ntBASIC20.34■□□□□ 0.85
C9orf139Q6ZV77 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 AL157400.5-201ENST00000507624 621 ntBASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
C9orf139Q6ZV77 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
C9orf139Q6ZV77 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
C9orf139Q6ZV77 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
C9orf139Q6ZV77 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C9orf139Q6ZV77 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.31■□□□□ 0.84
C9orf139Q6ZV77 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9orf139Q6ZV77 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9orf139Q6ZV77 ABCB10P1-201ENST00000614297 2181 ntBASIC20.3■□□□□ 0.84
C9orf139Q6ZV77 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C9orf139Q6ZV77 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C9orf139Q6ZV77 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 AC018358.1-201ENST00000631079 1402 ntBASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
C9orf139Q6ZV77 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 AL139393.2-201ENST00000608721 2025 ntBASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C9orf139Q6ZV77 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
C9orf139Q6ZV77 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C9orf139Q6ZV77 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf139Q6ZV77 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C9orf139Q6ZV77 AC007029.1-201ENST00000604183 313 ntBASIC20.25■□□□□ 0.83
C9orf139Q6ZV77 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms