Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.8■■■□□ 2.52
RFX7Q2KHR2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
RFX7Q2KHR2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
RFX7Q2KHR2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RFX7Q2KHR2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
RFX7Q2KHR2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RFX7Q2KHR2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
RFX7Q2KHR2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RFX7Q2KHR2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RFX7Q2KHR2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
RFX7Q2KHR2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RFX7Q2KHR2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
RFX7Q2KHR2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
RFX7Q2KHR2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RFX7Q2KHR2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.75■■■□□ 2.51
RFX7Q2KHR2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RFX7Q2KHR2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RFX7Q2KHR2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RFX7Q2KHR2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
RFX7Q2KHR2 RARRES2P2-201ENST00000394842 485 ntBASIC30.73■■■□□ 2.51
RFX7Q2KHR2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.73■■■□□ 2.51
RFX7Q2KHR2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
RFX7Q2KHR2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.73■■■□□ 2.51
RFX7Q2KHR2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RFX7Q2KHR2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.72■■■□□ 2.51
RFX7Q2KHR2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RFX7Q2KHR2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RFX7Q2KHR2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
RFX7Q2KHR2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RFX7Q2KHR2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.7■■■□□ 2.5
RFX7Q2KHR2 GPX1-201ENST00000419349 1106 ntBASIC30.69■■■□□ 2.5
RFX7Q2KHR2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.69■■■□□ 2.5
RFX7Q2KHR2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RFX7Q2KHR2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
RFX7Q2KHR2 AC110285.7-201ENST00000624417 1536 ntBASIC30.68■■■□□ 2.5
RFX7Q2KHR2 AC008813.1-201ENST00000536597 885 ntBASIC30.68■■■□□ 2.5
RFX7Q2KHR2 AC018358.1-201ENST00000631079 1402 ntBASIC30.68■■■□□ 2.5
RFX7Q2KHR2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RFX7Q2KHR2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RFX7Q2KHR2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RFX7Q2KHR2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.66■■■□□ 2.5
RFX7Q2KHR2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.65■■■□□ 2.5
RFX7Q2KHR2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RFX7Q2KHR2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.64■■■□□ 2.5
RFX7Q2KHR2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RFX7Q2KHR2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.63■■■□□ 2.49
RFX7Q2KHR2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
RFX7Q2KHR2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
RFX7Q2KHR2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
RFX7Q2KHR2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.61■■■□□ 2.49
RFX7Q2KHR2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.61■■■□□ 2.49
RFX7Q2KHR2 AC148477.6-201ENST00000623746 465 ntBASIC30.6■■■□□ 2.49
RFX7Q2KHR2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RFX7Q2KHR2 RNF126P1-201ENST00000567452 1320 ntBASIC30.6■■■□□ 2.49
RFX7Q2KHR2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RFX7Q2KHR2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RFX7Q2KHR2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RFX7Q2KHR2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RFX7Q2KHR2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
RFX7Q2KHR2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RFX7Q2KHR2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
RFX7Q2KHR2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RFX7Q2KHR2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.57■■■□□ 2.48
RFX7Q2KHR2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RFX7Q2KHR2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.57■■■□□ 2.48
RFX7Q2KHR2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.57■■■□□ 2.48
RFX7Q2KHR2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.57■■■□□ 2.48
RFX7Q2KHR2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.56■■■□□ 2.48
RFX7Q2KHR2 ABHD17AP5-201ENST00000580133 923 ntBASIC30.56■■■□□ 2.48
RFX7Q2KHR2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.56■■■□□ 2.48
RFX7Q2KHR2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.56■■■□□ 2.48
RFX7Q2KHR2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
RFX7Q2KHR2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RFX7Q2KHR2 BX255925.1-201ENST00000566954 1854 ntBASIC30.54■■■□□ 2.48
RFX7Q2KHR2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.54■■■□□ 2.48
RFX7Q2KHR2 LINC01003-201ENST00000564834 1764 ntBASIC30.54■■■□□ 2.48
RFX7Q2KHR2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
RFX7Q2KHR2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms