Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM3P40198 AC142086.6-201ENST00000621154 1765 ntBASIC20.48■□□□□ 0.87
CEACAM3P40198 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CEACAM3P40198 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CEACAM3P40198 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CEACAM3P40198 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM3P40198 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM3P40198 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM3P40198 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CEACAM3P40198 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CEACAM3P40198 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CEACAM3P40198 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CEACAM3P40198 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CEACAM3P40198 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEACAM3P40198 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CEACAM3P40198 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.45■□□□□ 0.86
CEACAM3P40198 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.45■□□□□ 0.86
CEACAM3P40198 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CEACAM3P40198 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CEACAM3P40198 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CEACAM3P40198 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CEACAM3P40198 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CEACAM3P40198 AC018358.1-201ENST00000631079 1402 ntBASIC20.43■□□□□ 0.86
CEACAM3P40198 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CEACAM3P40198 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEACAM3P40198 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CEACAM3P40198 HLA-V-202ENST00000446817 847 ntBASIC20.42■□□□□ 0.86
CEACAM3P40198 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CEACAM3P40198 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.42■□□□□ 0.86
CEACAM3P40198 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CEACAM3P40198 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.41■□□□□ 0.86
CEACAM3P40198 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CEACAM3P40198 MIR639-201ENST00000384974 98 ntBASIC20.41■□□□□ 0.86
CEACAM3P40198 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CEACAM3P40198 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CEACAM3P40198 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CEACAM3P40198 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CEACAM3P40198 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CEACAM3P40198 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.4■□□□□ 0.86
CEACAM3P40198 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CEACAM3P40198 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CEACAM3P40198 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CEACAM3P40198 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.39■□□□□ 0.86
CEACAM3P40198 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CEACAM3P40198 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.39■□□□□ 0.86
CEACAM3P40198 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEACAM3P40198 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.39■□□□□ 0.85
CEACAM3P40198 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CEACAM3P40198 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CEACAM3P40198 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.38■□□□□ 0.85
CEACAM3P40198 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.38■□□□□ 0.85
CEACAM3P40198 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.38■□□□□ 0.85
CEACAM3P40198 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CEACAM3P40198 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEACAM3P40198 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEACAM3P40198 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEACAM3P40198 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEACAM3P40198 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CEACAM3P40198 AC148477.6-201ENST00000623746 465 ntBASIC20.37■□□□□ 0.85
CEACAM3P40198 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CEACAM3P40198 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.36■□□□□ 0.85
CEACAM3P40198 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CEACAM3P40198 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CEACAM3P40198 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CEACAM3P40198 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CEACAM3P40198 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
CEACAM3P40198 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CEACAM3P40198 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CEACAM3P40198 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CEACAM3P40198 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CEACAM3P40198 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.34■□□□□ 0.85
CEACAM3P40198 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.34■□□□□ 0.85
CEACAM3P40198 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.34■□□□□ 0.85
CEACAM3P40198 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CEACAM3P40198 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CEACAM3P40198 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CEACAM3P40198 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CEACAM3P40198 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CEACAM3P40198 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CEACAM3P40198 BX255925.1-201ENST00000566954 1854 ntBASIC20.33■□□□□ 0.85
CEACAM3P40198 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CEACAM3P40198 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CEACAM3P40198 LINC01003-201ENST00000564834 1764 ntBASIC20.33■□□□□ 0.84
CEACAM3P40198 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CEACAM3P40198 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CEACAM3P40198 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.31■□□□□ 0.84
CEACAM3P40198 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.31■□□□□ 0.84
CEACAM3P40198 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CEACAM3P40198 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.3■□□□□ 0.84
CEACAM3P40198 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CEACAM3P40198 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CEACAM3P40198 MIR219A2-201ENST00000608502 1504 ntBASIC20.3■□□□□ 0.84
CEACAM3P40198 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CEACAM3P40198 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CEACAM3P40198 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CEACAM3P40198 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CEACAM3P40198 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CEACAM3P40198 AC126177.7-201ENST00000547904 679 ntBASIC20.27■□□□□ 0.84
CEACAM3P40198 MIR4449-201ENST00000578365 66 ntBASIC20.27■□□□□ 0.84
CEACAM3P40198 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms