Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.6■■■□□ 2.65
PDE4AP27815 WHAMMP2-203ENST00000563942 1603 ntBASIC31.6■■■□□ 2.65
PDE4AP27815 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
PDE4AP27815 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE4AP27815 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
PDE4AP27815 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE4AP27815 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PDE4AP27815 AC091060.1-201ENST00000623524 1766 ntBASIC31.58■■■□□ 2.65
PDE4AP27815 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.58■■■□□ 2.65
PDE4AP27815 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE4AP27815 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE4AP27815 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.58■■■□□ 2.65
PDE4AP27815 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PDE4AP27815 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.58■■■□□ 2.65
PDE4AP27815 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PDE4AP27815 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.57■■■□□ 2.64
PDE4AP27815 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.57■■■□□ 2.64
PDE4AP27815 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.57■■■□□ 2.64
PDE4AP27815 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PDE4AP27815 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PDE4AP27815 AC108673.1-201ENST00000510422 1159 ntBASIC31.56■■■□□ 2.64
PDE4AP27815 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PDE4AP27815 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.56■■■□□ 2.64
PDE4AP27815 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PDE4AP27815 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.55■■■□□ 2.64
PDE4AP27815 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PDE4AP27815 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.55■■■□□ 2.64
PDE4AP27815 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDE4AP27815 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PDE4AP27815 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PDE4AP27815 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.53■■■□□ 2.64
PDE4AP27815 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PDE4AP27815 AP002414.2-202ENST00000590929 1450 ntBASIC31.52■■■□□ 2.64
PDE4AP27815 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
PDE4AP27815 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
PDE4AP27815 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
PDE4AP27815 MIR3665-201ENST00000578708 105 ntBASIC31.49■■■□□ 2.63
PDE4AP27815 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PDE4AP27815 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
PDE4AP27815 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PDE4AP27815 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC31.48■■■□□ 2.63
PDE4AP27815 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.47■■■□□ 2.63
PDE4AP27815 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE4AP27815 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
PDE4AP27815 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PDE4AP27815 LINC00273-201ENST00000539813 1452 ntBASIC31.46■■■□□ 2.63
PDE4AP27815 AC087741.3-201ENST00000624270 1347 ntBASIC31.46■■■□□ 2.63
PDE4AP27815 AL162393.1-201ENST00000437852 946 ntBASIC31.45■■■□□ 2.63
PDE4AP27815 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.45■■■□□ 2.63
PDE4AP27815 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.45■■■□□ 2.62
PDE4AP27815 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PDE4AP27815 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PDE4AP27815 AP006261.1-201ENST00000584783 668 ntBASIC31.43■■■□□ 2.62
PDE4AP27815 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.43■■■□□ 2.62
PDE4AP27815 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDE4AP27815 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PDE4AP27815 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.42■■■□□ 2.62
PDE4AP27815 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
PDE4AP27815 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PDE4AP27815 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
PDE4AP27815 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
PDE4AP27815 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.41■■■□□ 2.62
PDE4AP27815 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PDE4AP27815 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDE4AP27815 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PDE4AP27815 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
PDE4AP27815 AC020928.2-201ENST00000588717 2197 ntBASIC31.39■■■□□ 2.61
PDE4AP27815 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE4AP27815 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PDE4AP27815 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PDE4AP27815 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.37■■■□□ 2.61
PDE4AP27815 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.37■■■□□ 2.61
PDE4AP27815 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PDE4AP27815 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
PDE4AP27815 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PDE4AP27815 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
PDE4AP27815 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PDE4AP27815 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDE4AP27815 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PDE4AP27815 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PDE4AP27815 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
PDE4AP27815 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.33■■■□□ 2.61
PDE4AP27815 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.33■■■□□ 2.61
PDE4AP27815 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PDE4AP27815 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.33■■■□□ 2.61
PDE4AP27815 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
PDE4AP27815 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PDE4AP27815 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PDE4AP27815 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
PDE4AP27815 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PDE4AP27815 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.31■■■□□ 2.6
PDE4AP27815 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDE4AP27815 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PDE4AP27815 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.31■■■□□ 2.6
PDE4AP27815 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PDE4AP27815 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PDE4AP27815 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PDE4AP27815 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PDE4AP27815 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PDE4AP27815 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms