Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RETP07949 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.47■■□□□ 1.67
RETP07949 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RETP07949 AC019069.1-201ENST00000610008 1333 ntBASIC25.46■■□□□ 1.67
RETP07949 AL592295.1-201ENST00000400984 884 ntBASIC25.46■■□□□ 1.67
RETP07949 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RETP07949 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RETP07949 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RETP07949 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
RETP07949 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETP07949 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.66
RETP07949 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.45■■□□□ 1.66
RETP07949 AC110285.7-201ENST00000624417 1536 ntBASIC25.45■■□□□ 1.66
RETP07949 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETP07949 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETP07949 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
RETP07949 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETP07949 AC135983.2-203ENST00000454486 1613 ntBASIC25.44■■□□□ 1.66
RETP07949 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RETP07949 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RETP07949 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RETP07949 WHAMMP2-203ENST00000563942 1603 ntBASIC25.43■■□□□ 1.66
RETP07949 MIR219A2-201ENST00000608502 1504 ntBASIC25.42■■□□□ 1.66
RETP07949 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RETP07949 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.41■■□□□ 1.66
RETP07949 AC129492.7-201ENST00000622992 756 ntBASIC25.41■■□□□ 1.66
RETP07949 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.41■■□□□ 1.66
RETP07949 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RETP07949 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RETP07949 AL451085.2-201ENST00000605085 799 ntBASIC25.4■■□□□ 1.66
RETP07949 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.4■■□□□ 1.66
RETP07949 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 AC126177.7-201ENST00000547904 679 ntBASIC25.39■■□□□ 1.66
RETP07949 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
RETP07949 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 AL161658.1-201ENST00000623641 1967 ntBASIC25.38■■□□□ 1.65
RETP07949 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RETP07949 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.37■■□□□ 1.65
RETP07949 DUX4L18-201ENST00000553347 1267 ntBASIC25.37■■□□□ 1.65
RETP07949 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETP07949 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RETP07949 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RETP07949 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.35■■□□□ 1.65
RETP07949 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
RETP07949 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.34■■□□□ 1.65
RETP07949 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
RETP07949 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.34■■□□□ 1.65
RETP07949 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.33■■□□□ 1.65
RETP07949 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RETP07949 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RETP07949 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.33■■□□□ 1.65
RETP07949 AC127502.1-201ENST00000399971 1502 ntBASIC25.32■■□□□ 1.64
RETP07949 AC139426.1-201ENST00000568218 2529 ntBASIC25.32■■□□□ 1.64
RETP07949 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RETP07949 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RETP07949 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RETP07949 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.31■■□□□ 1.64
RETP07949 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RETP07949 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.3■■□□□ 1.64
RETP07949 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RETP07949 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RETP07949 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 AL592293.1-201ENST00000502889 1188 ntBASIC25.29■■□□□ 1.64
RETP07949 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.29■■□□□ 1.64
RETP07949 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.28■■□□□ 1.64
RETP07949 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RETP07949 AC007029.1-201ENST00000604183 313 ntBASIC25.28■■□□□ 1.64
RETP07949 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.28■■□□□ 1.64
RETP07949 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 ST7-AS1-201ENST00000456775 1889 ntBASIC25.28■■□□□ 1.64
RETP07949 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
RETP07949 AC133552.2-201ENST00000619106 1032 ntBASIC25.27■■□□□ 1.64
RETP07949 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms