Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RETP07949 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.47■■□□□ 1.67
RETP07949 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RETP07949 AC019069.1-201ENST00000610008 1333 ntBASIC25.46■■□□□ 1.67
RETP07949 AL592295.1-201ENST00000400984 884 ntBASIC25.46■■□□□ 1.67
RETP07949 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RETP07949 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RETP07949 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RETP07949 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.45■■□□□ 1.67
RETP07949 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETP07949 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.66
RETP07949 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.45■■□□□ 1.66
RETP07949 AC110285.7-201ENST00000624417 1536 ntBASIC25.45■■□□□ 1.66
RETP07949 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RETP07949 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETP07949 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
RETP07949 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RETP07949 AC135983.2-203ENST00000454486 1613 ntBASIC25.44■■□□□ 1.66
RETP07949 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RETP07949 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RETP07949 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RETP07949 WHAMMP2-203ENST00000563942 1603 ntBASIC25.43■■□□□ 1.66
RETP07949 MIR219A2-201ENST00000608502 1504 ntBASIC25.42■■□□□ 1.66
RETP07949 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RETP07949 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RETP07949 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.41■■□□□ 1.66
RETP07949 AC129492.7-201ENST00000622992 756 ntBASIC25.41■■□□□ 1.66
RETP07949 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.41■■□□□ 1.66
RETP07949 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RETP07949 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
RETP07949 AL451085.2-201ENST00000605085 799 ntBASIC25.4■■□□□ 1.66
RETP07949 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.4■■□□□ 1.66
RETP07949 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RETP07949 AC126177.7-201ENST00000547904 679 ntBASIC25.39■■□□□ 1.66
RETP07949 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
RETP07949 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RETP07949 AL161658.1-201ENST00000623641 1967 ntBASIC25.38■■□□□ 1.65
RETP07949 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RETP07949 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.37■■□□□ 1.65
RETP07949 DUX4L18-201ENST00000553347 1267 ntBASIC25.37■■□□□ 1.65
RETP07949 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RETP07949 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
RETP07949 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RETP07949 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.35■■□□□ 1.65
RETP07949 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.35■■□□□ 1.65
RETP07949 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
RETP07949 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.34■■□□□ 1.65
RETP07949 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.34■■□□□ 1.65
RETP07949 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RETP07949 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.34■■□□□ 1.65
RETP07949 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.33■■□□□ 1.65
RETP07949 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RETP07949 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
RETP07949 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.33■■□□□ 1.65
RETP07949 AC127502.1-201ENST00000399971 1502 ntBASIC25.32■■□□□ 1.64
RETP07949 AC139426.1-201ENST00000568218 2529 ntBASIC25.32■■□□□ 1.64
RETP07949 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
RETP07949 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RETP07949 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
RETP07949 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.31■■□□□ 1.64
RETP07949 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RETP07949 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.3■■□□□ 1.64
RETP07949 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RETP07949 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RETP07949 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 AL592293.1-201ENST00000502889 1188 ntBASIC25.29■■□□□ 1.64
RETP07949 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.29■■□□□ 1.64
RETP07949 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RETP07949 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.28■■□□□ 1.64
RETP07949 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RETP07949 AC007029.1-201ENST00000604183 313 ntBASIC25.28■■□□□ 1.64
RETP07949 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.28■■□□□ 1.64
RETP07949 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RETP07949 ST7-AS1-201ENST00000456775 1889 ntBASIC25.28■■□□□ 1.64
RETP07949 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
RETP07949 AC133552.2-201ENST00000619106 1032 ntBASIC25.27■■□□□ 1.64
RETP07949 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms