Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGN1P05114 AC108673.1-201ENST00000510422 1159 ntBASIC22.68■■□□□ 1.22
HMGN1P05114 AL449106.1-201ENST00000608517 1980 ntBASIC22.68■■□□□ 1.22
HMGN1P05114 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.67■■□□□ 1.22
HMGN1P05114 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.67■■□□□ 1.22
HMGN1P05114 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGN1P05114 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
HMGN1P05114 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
HMGN1P05114 AC005559.1-201ENST00000589661 871 ntBASIC22.67■■□□□ 1.22
HMGN1P05114 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGN1P05114 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGN1P05114 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGN1P05114 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGN1P05114 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGN1P05114 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGN1P05114 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGN1P05114 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
HMGN1P05114 WHAMMP2-203ENST00000563942 1603 ntBASIC22.66■■□□□ 1.22
HMGN1P05114 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGN1P05114 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGN1P05114 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGN1P05114 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGN1P05114 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGN1P05114 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.65■■□□□ 1.22
HMGN1P05114 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
HMGN1P05114 AC091060.1-201ENST00000623524 1766 ntBASIC22.65■■□□□ 1.22
HMGN1P05114 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
HMGN1P05114 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
HMGN1P05114 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGN1P05114 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGN1P05114 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGN1P05114 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGN1P05114 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.63■■□□□ 1.21
HMGN1P05114 LINC00273-201ENST00000539813 1452 ntBASIC22.62■■□□□ 1.21
HMGN1P05114 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGN1P05114 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGN1P05114 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGN1P05114 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGN1P05114 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGN1P05114 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGN1P05114 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
HMGN1P05114 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGN1P05114 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGN1P05114 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGN1P05114 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HMGN1P05114 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HMGN1P05114 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGN1P05114 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGN1P05114 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HMGN1P05114 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.59■■□□□ 1.21
HMGN1P05114 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGN1P05114 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.59■■□□□ 1.21
HMGN1P05114 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGN1P05114 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGN1P05114 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGN1P05114 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.58■■□□□ 1.21
HMGN1P05114 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
HMGN1P05114 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGN1P05114 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGN1P05114 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGN1P05114 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGN1P05114 AC145676.1-201ENST00000514988 2004 ntBASIC22.56■■□□□ 1.2
HMGN1P05114 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGN1P05114 MIR6090-201ENST00000622481 60 ntBASIC22.55■■□□□ 1.2
HMGN1P05114 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMGN1P05114 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGN1P05114 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGN1P05114 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGN1P05114 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
HMGN1P05114 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
HMGN1P05114 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGN1P05114 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.53■■□□□ 1.2
HMGN1P05114 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGN1P05114 SUZ12P1-203ENST00000578195 985 ntBASIC22.53■■□□□ 1.2
HMGN1P05114 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGN1P05114 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGN1P05114 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGN1P05114 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGN1P05114 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGN1P05114 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGN1P05114 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
HMGN1P05114 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGN1P05114 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGN1P05114 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGN1P05114 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.5■■□□□ 1.19
HMGN1P05114 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGN1P05114 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGN1P05114 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HMGN1P05114 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.49■■□□□ 1.19
HMGN1P05114 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HMGN1P05114 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGN1P05114 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HMGN1P05114 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGN1P05114 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HMGN1P05114 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.48■■□□□ 1.19
HMGN1P05114 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HMGN1P05114 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HMGN1P05114 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
HMGN1P05114 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HMGN1P05114 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms