Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
TRBV12-3P01733 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV12-3P01733 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV12-3P01733 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV12-3P01733 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV12-3P01733 HLA-V-202ENST00000446817 847 ntBASIC19.49■□□□□ 0.71
TRBV12-3P01733 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV12-3P01733 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV12-3P01733 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV12-3P01733 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRBV12-3P01733 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV12-3P01733 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV12-3P01733 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV12-3P01733 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV12-3P01733 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV12-3P01733 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRBV12-3P01733 MIR639-201ENST00000384974 98 ntBASIC19.45■□□□□ 0.7
TRBV12-3P01733 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV12-3P01733 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV12-3P01733 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV12-3P01733 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRBV12-3P01733 AC018358.1-201ENST00000631079 1402 ntBASIC19.43■□□□□ 0.7
TRBV12-3P01733 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRBV12-3P01733 LINC01003-201ENST00000564834 1764 ntBASIC19.43■□□□□ 0.7
TRBV12-3P01733 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV12-3P01733 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV12-3P01733 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRBV12-3P01733 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.42■□□□□ 0.7
TRBV12-3P01733 AC008813.1-201ENST00000536597 885 ntBASIC19.42■□□□□ 0.7
TRBV12-3P01733 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV12-3P01733 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV12-3P01733 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV12-3P01733 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRBV12-3P01733 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRBV12-3P01733 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV12-3P01733 BX255925.1-201ENST00000566954 1854 ntBASIC19.39■□□□□ 0.7
TRBV12-3P01733 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV12-3P01733 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRBV12-3P01733 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV12-3P01733 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV12-3P01733 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 MIR219A2-201ENST00000608502 1504 ntBASIC19.37■□□□□ 0.69
TRBV12-3P01733 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV12-3P01733 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV12-3P01733 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV12-3P01733 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV12-3P01733 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV12-3P01733 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 AC148477.6-201ENST00000623746 465 ntBASIC19.35■□□□□ 0.69
TRBV12-3P01733 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV12-3P01733 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV12-3P01733 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV12-3P01733 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV12-3P01733 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV12-3P01733 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV12-3P01733 MIR4449-201ENST00000578365 66 ntBASIC19.33■□□□□ 0.68
TRBV12-3P01733 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
TRBV12-3P01733 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRBV12-3P01733 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TRBV12-3P01733 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TRBV12-3P01733 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV12-3P01733 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV12-3P01733 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms