Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
URB1O60287 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
URB1O60287 AC007029.1-201ENST00000604183 313 ntBASIC23.94■■□□□ 1.42
URB1O60287 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
URB1O60287 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
URB1O60287 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.94■■□□□ 1.42
URB1O60287 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
URB1O60287 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
URB1O60287 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.93■■□□□ 1.42
URB1O60287 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
URB1O60287 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.93■■□□□ 1.42
URB1O60287 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
URB1O60287 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
URB1O60287 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
URB1O60287 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.91■■□□□ 1.42
URB1O60287 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
URB1O60287 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
URB1O60287 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
URB1O60287 KRT8P33-201ENST00000508125 1423 ntBASIC23.9■■□□□ 1.42
URB1O60287 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
URB1O60287 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.9■■□□□ 1.42
URB1O60287 AC126177.7-201ENST00000547904 679 ntBASIC23.9■■□□□ 1.42
URB1O60287 AC010980.1-201ENST00000587192 1142 ntBASIC23.9■■□□□ 1.42
URB1O60287 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
URB1O60287 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
URB1O60287 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
URB1O60287 AC127502.1-201ENST00000399971 1502 ntBASIC23.89■■□□□ 1.42
URB1O60287 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
URB1O60287 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
URB1O60287 DUX4L9-201ENST00000449051 1259 ntBASIC23.89■■□□□ 1.42
URB1O60287 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
URB1O60287 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
URB1O60287 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
URB1O60287 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
URB1O60287 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
URB1O60287 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
URB1O60287 AC074183.2-201ENST00000623112 922 ntBASIC23.87■■□□□ 1.41
URB1O60287 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
URB1O60287 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
URB1O60287 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
URB1O60287 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
URB1O60287 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
URB1O60287 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
URB1O60287 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.86■■□□□ 1.41
URB1O60287 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.86■■□□□ 1.41
URB1O60287 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
URB1O60287 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
URB1O60287 BHLHE23-202ENST00000612929 1109 ntBASIC23.85■■□□□ 1.41
URB1O60287 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
URB1O60287 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
URB1O60287 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.85■■□□□ 1.41
URB1O60287 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
URB1O60287 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
URB1O60287 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
URB1O60287 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.84■■□□□ 1.41
URB1O60287 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
URB1O60287 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
URB1O60287 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.83■■□□□ 1.41
URB1O60287 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.83■■□□□ 1.41
URB1O60287 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
URB1O60287 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
URB1O60287 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
URB1O60287 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
URB1O60287 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.82■■□□□ 1.4
URB1O60287 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.82■■□□□ 1.4
URB1O60287 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.82■■□□□ 1.4
URB1O60287 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.82■■□□□ 1.4
URB1O60287 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.82■■□□□ 1.4
URB1O60287 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
URB1O60287 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
URB1O60287 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
URB1O60287 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.81■■□□□ 1.4
URB1O60287 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.81■■□□□ 1.4
URB1O60287 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
URB1O60287 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.8■■□□□ 1.4
URB1O60287 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.8■■□□□ 1.4
URB1O60287 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.8■■□□□ 1.4
URB1O60287 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
URB1O60287 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.79■■□□□ 1.4
URB1O60287 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
URB1O60287 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.79■■□□□ 1.4
URB1O60287 RAP2CP1-202ENST00000605179 643 ntBASIC23.79■■□□□ 1.4
URB1O60287 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
URB1O60287 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.78■■□□□ 1.4
URB1O60287 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.78■■□□□ 1.4
URB1O60287 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
URB1O60287 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
URB1O60287 YBX1P4-201ENST00000392794 808 ntBASIC23.77■■□□□ 1.4
URB1O60287 AC139795.1-202ENST00000500444 432 ntBASIC23.77■■□□□ 1.4
URB1O60287 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
URB1O60287 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
URB1O60287 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
URB1O60287 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
URB1O60287 AL356441.2-201ENST00000443009 864 ntBASIC23.76■■□□□ 1.39
URB1O60287 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
URB1O60287 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.76■■□□□ 1.39
URB1O60287 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
URB1O60287 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
URB1O60287 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
URB1O60287 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms