Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDUFB3O43676 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NDUFB3O43676 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21■□□□□ 0.95
NDUFB3O43676 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NDUFB3O43676 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21■□□□□ 0.95
NDUFB3O43676 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDUFB3O43676 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21■□□□□ 0.95
NDUFB3O43676 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDUFB3O43676 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDUFB3O43676 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.98■□□□□ 0.95
NDUFB3O43676 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.98■□□□□ 0.95
NDUFB3O43676 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDUFB3O43676 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
NDUFB3O43676 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.97■□□□□ 0.95
NDUFB3O43676 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NDUFB3O43676 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFB3O43676 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
NDUFB3O43676 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NDUFB3O43676 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 AC142086.6-201ENST00000621154 1765 ntBASIC20.95■□□□□ 0.94
NDUFB3O43676 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NDUFB3O43676 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
NDUFB3O43676 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NDUFB3O43676 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
NDUFB3O43676 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFB3O43676 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NDUFB3O43676 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
NDUFB3O43676 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NDUFB3O43676 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
NDUFB3O43676 AC018358.1-201ENST00000631079 1402 ntBASIC20.93■□□□□ 0.94
NDUFB3O43676 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NDUFB3O43676 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.92■□□□□ 0.94
NDUFB3O43676 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NDUFB3O43676 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDUFB3O43676 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFB3O43676 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDUFB3O43676 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.91■□□□□ 0.94
NDUFB3O43676 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.91■□□□□ 0.94
NDUFB3O43676 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
NDUFB3O43676 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
NDUFB3O43676 AC148477.6-201ENST00000623746 465 ntBASIC20.91■□□□□ 0.94
NDUFB3O43676 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NDUFB3O43676 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.9■□□□□ 0.94
NDUFB3O43676 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.9■□□□□ 0.94
NDUFB3O43676 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFB3O43676 MIR4449-201ENST00000578365 66 ntBASIC20.89■□□□□ 0.93
NDUFB3O43676 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDUFB3O43676 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
NDUFB3O43676 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.88■□□□□ 0.93
NDUFB3O43676 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.88■□□□□ 0.93
NDUFB3O43676 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.87■□□□□ 0.93
NDUFB3O43676 MIR219A2-201ENST00000608502 1504 ntBASIC20.87■□□□□ 0.93
NDUFB3O43676 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NDUFB3O43676 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDUFB3O43676 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDUFB3O43676 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.86■□□□□ 0.93
NDUFB3O43676 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFB3O43676 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDUFB3O43676 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NDUFB3O43676 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NDUFB3O43676 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
NDUFB3O43676 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDUFB3O43676 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.84■□□□□ 0.93
NDUFB3O43676 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.84■□□□□ 0.93
NDUFB3O43676 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NDUFB3O43676 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDUFB3O43676 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.83■□□□□ 0.92
NDUFB3O43676 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDUFB3O43676 LINC01003-201ENST00000564834 1764 ntBASIC20.82■□□□□ 0.92
NDUFB3O43676 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms