Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.67■□□□□ 0.74
COLCA2A8K830 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COLCA2A8K830 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COLCA2A8K830 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA2A8K830 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COLCA2A8K830 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
COLCA2A8K830 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA2A8K830 AC068473.5-201ENST00000616428 2072 ntBASIC19.65■□□□□ 0.74
COLCA2A8K830 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA2A8K830 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COLCA2A8K830 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.64■□□□□ 0.74
COLCA2A8K830 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COLCA2A8K830 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA2A8K830 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
COLCA2A8K830 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA2A8K830 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA2A8K830 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COLCA2A8K830 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA2A8K830 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA2A8K830 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA2A8K830 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COLCA2A8K830 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA2A8K830 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA2A8K830 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COLCA2A8K830 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.62■□□□□ 0.73
COLCA2A8K830 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COLCA2A8K830 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA2A8K830 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COLCA2A8K830 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COLCA2A8K830 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.6■□□□□ 0.73
COLCA2A8K830 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA2A8K830 ERN1-208ENST00000606895 2068 ntBASIC19.6■□□□□ 0.73
COLCA2A8K830 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA2A8K830 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA2A8K830 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COLCA2A8K830 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 DUSP8P4-201ENST00000399538 1761 ntBASIC19.59■□□□□ 0.73
COLCA2A8K830 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COLCA2A8K830 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COLCA2A8K830 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COLCA2A8K830 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.58■□□□□ 0.72
COLCA2A8K830 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
COLCA2A8K830 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA2A8K830 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA2A8K830 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COLCA2A8K830 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COLCA2A8K830 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COLCA2A8K830 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COLCA2A8K830 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA2A8K830 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA2A8K830 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA2A8K830 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COLCA2A8K830 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
COLCA2A8K830 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COLCA2A8K830 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COLCA2A8K830 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COLCA2A8K830 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COLCA2A8K830 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
COLCA2A8K830 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.53■□□□□ 0.72
COLCA2A8K830 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COLCA2A8K830 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.53■□□□□ 0.72
COLCA2A8K830 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA2A8K830 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA2A8K830 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COLCA2A8K830 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COLCA2A8K830 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA2A8K830 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA2A8K830 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COLCA2A8K830 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA2A8K830 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.51■□□□□ 0.71
COLCA2A8K830 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.51■□□□□ 0.71
COLCA2A8K830 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA2A8K830 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA2A8K830 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.5■□□□□ 0.71
COLCA2A8K830 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA2A8K830 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA2A8K830 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA2A8K830 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms