Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RBFOX3A6NFN3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.87■□□□□ 0.77
RBFOX3A6NFN3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RBFOX3A6NFN3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.87■□□□□ 0.77
RBFOX3A6NFN3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RBFOX3A6NFN3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBFOX3A6NFN3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RBFOX3A6NFN3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.85■□□□□ 0.77
RBFOX3A6NFN3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RBFOX3A6NFN3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RBFOX3A6NFN3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.83■□□□□ 0.77
RBFOX3A6NFN3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RBFOX3A6NFN3 DUSP8P4-201ENST00000399538 1761 ntBASIC19.83■□□□□ 0.76
RBFOX3A6NFN3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RBFOX3A6NFN3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RBFOX3A6NFN3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RBFOX3A6NFN3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RBFOX3A6NFN3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RBFOX3A6NFN3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RBFOX3A6NFN3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RBFOX3A6NFN3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RBFOX3A6NFN3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RBFOX3A6NFN3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RBFOX3A6NFN3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RBFOX3A6NFN3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.79■□□□□ 0.76
RBFOX3A6NFN3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RBFOX3A6NFN3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RBFOX3A6NFN3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RBFOX3A6NFN3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.78■□□□□ 0.76
RBFOX3A6NFN3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBFOX3A6NFN3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.77■□□□□ 0.76
RBFOX3A6NFN3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RBFOX3A6NFN3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RBFOX3A6NFN3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RBFOX3A6NFN3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBFOX3A6NFN3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.76■□□□□ 0.75
RBFOX3A6NFN3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.76■□□□□ 0.75
RBFOX3A6NFN3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RBFOX3A6NFN3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBFOX3A6NFN3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RBFOX3A6NFN3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBFOX3A6NFN3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RBFOX3A6NFN3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBFOX3A6NFN3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RBFOX3A6NFN3 AC092803.2-201ENST00000564287 1899 ntBASIC19.74■□□□□ 0.75
RBFOX3A6NFN3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.74■□□□□ 0.75
RBFOX3A6NFN3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RBFOX3A6NFN3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RBFOX3A6NFN3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RBFOX3A6NFN3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.73■□□□□ 0.75
RBFOX3A6NFN3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RBFOX3A6NFN3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RBFOX3A6NFN3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.72■□□□□ 0.75
RBFOX3A6NFN3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RBFOX3A6NFN3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RBFOX3A6NFN3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RBFOX3A6NFN3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RBFOX3A6NFN3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RBFOX3A6NFN3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RBFOX3A6NFN3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RBFOX3A6NFN3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RBFOX3A6NFN3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RBFOX3A6NFN3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.69■□□□□ 0.74
RBFOX3A6NFN3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RBFOX3A6NFN3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RBFOX3A6NFN3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RBFOX3A6NFN3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RBFOX3A6NFN3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RBFOX3A6NFN3 ERN1-208ENST00000606895 2068 ntBASIC19.67■□□□□ 0.74
RBFOX3A6NFN3 AC133561.1-201ENST00000568600 2415 ntBASIC19.66■□□□□ 0.74
RBFOX3A6NFN3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RBFOX3A6NFN3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RBFOX3A6NFN3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms