Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 BX255925.1-201ENST00000566954 1854 ntBASIC17.95■□□□□ 0.46
TRGV4A0A0C4DH28 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRGV4A0A0C4DH28 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRGV4A0A0C4DH28 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV4A0A0C4DH28 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRGV4A0A0C4DH28 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRGV4A0A0C4DH28 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV4A0A0C4DH28 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV4A0A0C4DH28 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV4A0A0C4DH28 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.91■□□□□ 0.46
TRGV4A0A0C4DH28 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV4A0A0C4DH28 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.91■□□□□ 0.46
TRGV4A0A0C4DH28 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV4A0A0C4DH28 LINC01003-201ENST00000564834 1764 ntBASIC17.9■□□□□ 0.46
TRGV4A0A0C4DH28 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV4A0A0C4DH28 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.9■□□□□ 0.46
TRGV4A0A0C4DH28 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRGV4A0A0C4DH28 AC110285.7-201ENST00000624417 1536 ntBASIC17.89■□□□□ 0.45
TRGV4A0A0C4DH28 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRGV4A0A0C4DH28 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV4A0A0C4DH28 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRGV4A0A0C4DH28 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRGV4A0A0C4DH28 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRGV4A0A0C4DH28 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRGV4A0A0C4DH28 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.87■□□□□ 0.45
TRGV4A0A0C4DH28 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRGV4A0A0C4DH28 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.87■□□□□ 0.45
TRGV4A0A0C4DH28 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.87■□□□□ 0.45
TRGV4A0A0C4DH28 LINC01971-201ENST00000617888 1048 ntBASIC17.87■□□□□ 0.45
TRGV4A0A0C4DH28 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV4A0A0C4DH28 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 AC018358.1-201ENST00000631079 1402 ntBASIC17.85■□□□□ 0.45
TRGV4A0A0C4DH28 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV4A0A0C4DH28 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRGV4A0A0C4DH28 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV4A0A0C4DH28 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV4A0A0C4DH28 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV4A0A0C4DH28 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 ZNRF2P2-203ENST00000454624 420 ntBASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.83■□□□□ 0.44
TRGV4A0A0C4DH28 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRGV4A0A0C4DH28 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV4A0A0C4DH28 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV4A0A0C4DH28 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV4A0A0C4DH28 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.81■□□□□ 0.44
TRGV4A0A0C4DH28 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV4A0A0C4DH28 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.8■□□□□ 0.44
TRGV4A0A0C4DH28 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.8■□□□□ 0.44
TRGV4A0A0C4DH28 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRGV4A0A0C4DH28 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV4A0A0C4DH28 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV4A0A0C4DH28 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRGV4A0A0C4DH28 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms