Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV26-1A0A087WT03 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV26-1A0A087WT03 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV26-1A0A087WT03 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV26-1A0A087WT03 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV26-1A0A087WT03 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV26-1A0A087WT03 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV26-1A0A087WT03 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV26-1A0A087WT03 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV26-1A0A087WT03 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV26-1A0A087WT03 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV26-1A0A087WT03 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV26-1A0A087WT03 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV26-1A0A087WT03 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV26-1A0A087WT03 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV26-1A0A087WT03 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV26-1A0A087WT03 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV26-1A0A087WT03 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 MIR3648-2-201ENST00000581792 180 ntBASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 MIR3648-1-201ENST00000615959 180 ntBASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 CR559946.2-201ENST00000623684 991 ntBASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV26-1A0A087WT03 AC110285.7-201ENST00000624417 1536 ntBASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV26-1A0A087WT03 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 AC016575.1-201ENST00000607026 382 ntBASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV26-1A0A087WT03 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV26-1A0A087WT03 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV26-1A0A087WT03 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV26-1A0A087WT03 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV26-1A0A087WT03 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV26-1A0A087WT03 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV26-1A0A087WT03 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV26-1A0A087WT03 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV26-1A0A087WT03 HLA-V-202ENST00000446817 847 ntBASIC17.85■□□□□ 0.45
TRAV26-1A0A087WT03 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV26-1A0A087WT03 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV26-1A0A087WT03 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV26-1A0A087WT03 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV26-1A0A087WT03 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV26-1A0A087WT03 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV26-1A0A087WT03 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV26-1A0A087WT03 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV26-1A0A087WT03 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV26-1A0A087WT03 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV26-1A0A087WT03 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV26-1A0A087WT03 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV26-1A0A087WT03 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV26-1A0A087WT03 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV26-1A0A087WT03 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV26-1A0A087WT03 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV26-1A0A087WT03 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV26-1A0A087WT03 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV26-1A0A087WT03 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV26-1A0A087WT03 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms