RNA–Protein interactions for RNA: tW(CCA)P

tW(CCA)P, Transcript of Tryptophan tRNA (tRNA-Trp), predicted by tRNAscan-SE analysis, yeastyeast

Gene tW(CCA)P, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tW(CCA)PtW(CCA)P INO80P53115 1489 aa5.45□□□□□ -1.54
tW(CCA)PtW(CCA)P MON2P48563 1636 aaPredicted RBP5.3□□□□□ -1.56
tW(CCA)PtW(CCA)P DNA2P38859 1522 aa5.15□□□□□ -1.58
tW(CCA)PtW(CCA)P SWR1Q05471 1514 aa5.09□□□□□ -1.59
tW(CCA)PtW(CCA)P SGS1P35187 1447 aa5.06□□□□□ -1.6
tW(CCA)PtW(CCA)P RSE1Q04693 1361 aaKnown RBP5.05□□□□□ -1.6
tW(CCA)PtW(CCA)P TCB3Q03640 1545 aaKnown RBP5.02□□□□□ -1.61
tW(CCA)PtW(CCA)P KOG1P38873 1557 aa5□□□□□ -1.61
tW(CCA)PtW(CCA)P TY1B-DR4Q07793 1604 aa4.97□□□□□ -1.61
tW(CCA)PtW(CCA)P MTC1P47018 478 aaKnown RBP4.92□□□□□ -1.62
tW(CCA)PtW(CCA)P SPA2P23201 1466 aaKnown RBP4.88□□□□□ -1.63
tW(CCA)PtW(CCA)P SPT6P23615 1451 aaKnown RBP4.88□□□□□ -1.63
tW(CCA)PtW(CCA)P ECM5Q03214 1411 aa4.85□□□□□ -1.63
tW(CCA)PtW(CCA)P HSL1P34244 1518 aa4.84□□□□□ -1.63
tW(CCA)PtW(CCA)P HIR3P47171 1648 aa4.75□□□□□ -1.65
tW(CCA)PtW(CCA)P BUD4P47136 1447 aa4.73□□□□□ -1.65
tW(CCA)PtW(CCA)P XRN1P22147 1528 aaKnown RBP4.72□□□□□ -1.65
tW(CCA)PtW(CCA)P TAF2P23255 1407 aa4.68□□□□□ -1.66
tW(CCA)PtW(CCA)P MDS3P53094 1487 aa4.67□□□□□ -1.66
tW(CCA)PtW(CCA)P THO2P53552 1597 aaKnown RBP4.66□□□□□ -1.66
tW(CCA)PtW(CCA)P SKI3P17883 1432 aaKnown RBP4.63□□□□□ -1.67
tW(CCA)PtW(CCA)P SSN2P38931 1420 aa4.61□□□□□ -1.67
tW(CCA)PtW(CCA)P REV3P14284 1504 aa4.59□□□□□ -1.67
tW(CCA)PtW(CCA)P PEP1P32319 1579 aa4.58□□□□□ -1.68
tW(CCA)PtW(CCA)P DRS1P32892 752 aaKnown RBP4.58□□□□□ -1.68
tW(CCA)PtW(CCA)P RQC2Q12532 1038 aaKnown RBP4.58□□□□□ -1.68
tW(CCA)PtW(CCA)P BPT1P14772 1559 aa4.57□□□□□ -1.68
tW(CCA)PtW(CCA)P ATG2P53855 1592 aa4.56□□□□□ -1.68
tW(CCA)PtW(CCA)P UFD4P33202 1483 aa4.49□□□□□ -1.69
tW(CCA)PtW(CCA)P YCF1P39109 1515 aaKnown RBP4.46□□□□□ -1.69
tW(CCA)PtW(CCA)P SIN3P22579 1536 aa4.44□□□□□ -1.7
tW(CCA)PtW(CCA)P SSK2P53599 1579 aa4.43□□□□□ -1.7
tW(CCA)PtW(CCA)P ESP1Q03018 1630 aa4.43□□□□□ -1.7
tW(CCA)PtW(CCA)P MIF2P35201 549 aa4.41□□□□□ -1.7
tW(CCA)PtW(CCA)P SCC2Q04002 1493 aa4.41□□□□□ -1.7
tW(CCA)PtW(CCA)P ITT1Q04638 464 aa4.4□□□□□ -1.71
tW(CCA)PtW(CCA)P CHD1P32657 1468 aa4.4□□□□□ -1.71
tW(CCA)PtW(CCA)P YPK9Q12697 1472 aa4.39□□□□□ -1.71
tW(CCA)PtW(CCA)P ABP1P15891 592 aaKnown RBP4.39□□□□□ -1.71
tW(CCA)PtW(CCA)P RPO31P04051 1460 aa4.38□□□□□ -1.71
tW(CCA)PtW(CCA)P DNF1P32660 1571 aa4.37□□□□□ -1.71
tW(CCA)PtW(CCA)P MET5P47169 1442 aa4.36□□□□□ -1.71
tW(CCA)PtW(CCA)P PAN1P32521 1480 aa4.36□□□□□ -1.71
tW(CCA)PtW(CCA)P CDC25P04821 1589 aa4.36□□□□□ -1.71
tW(CCA)PtW(CCA)P MYO2P19524 1574 aaKnown RBP4.34□□□□□ -1.71
tW(CCA)PtW(CCA)P TOP2P06786 1428 aaKnown RBP4.32□□□□□ -1.72
tW(CCA)PtW(CCA)P MMS22Q06164 1454 aa4.31□□□□□ -1.72
tW(CCA)PtW(CCA)P LTE1P07866 1435 aa4.31□□□□□ -1.72
tW(CCA)PtW(CCA)P TRM732Q03496 1420 aa4.31□□□□□ -1.72
tW(CCA)PtW(CCA)P ESC1Q03661 1658 aaKnown RBP4.31□□□□□ -1.72
tW(CCA)PtW(CCA)P YFR006WP43590 535 aa4.3□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-LR1P0C2J3 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-FP0CX63 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-GR2P0CX64 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-CP25384 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-DR2Q03494 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY1B-DR1Q03855 1755 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-DR3Q07791 1770 aaKnown RBP4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-OR1Q12113 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-DR1Q12472 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P TY2B-OR2Q12501 1770 aa4.29□□□□□ -1.72
tW(CCA)PtW(CCA)P RKR1Q04781 1562 aa4.28□□□□□ -1.72
tW(CCA)PtW(CCA)P MMS1Q06211 1407 aa4.28□□□□□ -1.72
tW(CCA)PtW(CCA)P TY1B-BRQ12193 1756 aa4.27□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-GR3Q12316 1755 aa4.27□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-ORQ92393 1755 aa4.27□□□□□ -1.73
tW(CCA)PtW(CCA)P STU1P38198 1513 aa4.27□□□□□ -1.73
tW(CCA)PtW(CCA)P GEA2P39993 1459 aaKnown RBP4.26□□□□□ -1.73
tW(CCA)PtW(CCA)P RTT106P40161 455 aa4.26□□□□□ -1.73
tW(CCA)PtW(CCA)P SPP41P38904 1435 aa4.26□□□□□ -1.73
tW(CCA)PtW(CCA)P DRS2P39524 1355 aa4.26□□□□□ -1.73
tW(CCA)PtW(CCA)P RPA190P10964 1664 aaKnown RBP4.26□□□□□ -1.73
tW(CCA)PtW(CCA)P NUP159P40477 1460 aa4.25□□□□□ -1.73
tW(CCA)PtW(CCA)P POL1P13382 1468 aa4.24□□□□□ -1.73
tW(CCA)PtW(CCA)P BNI1P41832 1953 aa4.24□□□□□ -1.73
tW(CCA)PtW(CCA)P SMC4Q12267 1418 aa4.24□□□□□ -1.73
tW(CCA)PtW(CCA)P MET10P39692 1035 aa4.24□□□□□ -1.73
tW(CCA)PtW(CCA)P YOR1P53049 1477 aa4.24□□□□□ -1.73
tW(CCA)PtW(CCA)P TSC11P40061 1430 aa4.23□□□□□ -1.73
tW(CCA)PtW(CCA)P TY2B-BQ12491 1770 aa4.23□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-HO13535 1793 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-DR5P0C2I2 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-DR6P0C2I3 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-LR2P0C2I5 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-LR3P0C2I6 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-PR1P0C2I9 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-PR2P0C2J0 1756 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-PR3P0C2J1 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-JR1P47098 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-ML2Q03434 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-ER1Q03612 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-ML1Q04711 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-GR2Q12269 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-OLQ12273 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-PLQ12414 1755 aaKnown RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P SAS10Q12136 610 aaPredicted RBP4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P TY1B-DR3Q99231 1755 aa4.22□□□□□ -1.73
tW(CCA)PtW(CCA)P VPS15P22219 1454 aa4.21□□□□□ -1.74
tW(CCA)PtW(CCA)P IFH1P39520 1085 aa4.19□□□□□ -1.74
tW(CCA)PtW(CCA)P YRF1-1P0CX20 1796 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms