RNA–Protein interactions for RNA: YOR087W

YVC1, Transcript of Vacuolar cation channel, yeastyeast

Gene YVC1, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YVC1YOR087W DRS1P32892 752 aaKnown RBP10.41□□□□□ -0.74
YVC1YOR087W MTC1P47018 478 aaKnown RBP9.85□□□□□ -0.83
YVC1YOR087W BFR2Q06631 534 aaKnown RBP9.25□□□□□ -0.93
YVC1YOR087W TFA1P36100 482 aa9.07□□□□□ -0.96
YVC1YOR087W AVT3P36062 692 aa8.72□□□□□ -1.01
YVC1YOR087W DIP2Q12220 943 aaPredicted RBP8.69□□□□□ -1.02
YVC1YOR087W RQC2Q12532 1038 aaKnown RBP8.3□□□□□ -1.08
YVC1YOR087W RSE1Q04693 1361 aaKnown RBP8.07□□□□□ -1.12
YVC1YOR087W ISW2Q08773 1120 aa7.91□□□□□ -1.14
YVC1YOR087W RPG1P38249 964 aaKnown RBP7.76□□□□□ -1.17
YVC1YOR087W RPL17AP05740 184 aaKnown RBP7.72□□□□□ -1.17
YVC1YOR087W RPL17BP46990 184 aaKnown RBP7.72□□□□□ -1.17
YVC1YOR087W FAP1P53971 965 aa7.67□□□□□ -1.18
YVC1YOR087W DMA1P38823 416 aa7.64□□□□□ -1.19
YVC1YOR087W PRI1P10363 409 aa7.61□□□□□ -1.19
YVC1YOR087W REB1P21538 810 aa7.59□□□□□ -1.19
YVC1YOR087W PTP3P40048 928 aa7.54□□□□□ -1.2
YVC1YOR087W RIM101P33400 625 aa7.49□□□□□ -1.21
YVC1YOR087W SPT21P35209 758 aa7.48□□□□□ -1.21
YVC1YOR087W TAF7Q05021 590 aa7.44□□□□□ -1.22
YVC1YOR087W AAD16Q02895 342 aa7.42□□□□□ -1.22
YVC1YOR087W SSP1P38871 571 aa7.4□□□□□ -1.22
YVC1YOR087W LEO1P38439 464 aa7.27□□□□□ -1.25
YVC1YOR087W OXP1P28273 1286 aa7.26□□□□□ -1.25
YVC1YOR087W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
YVC1YOR087W TSR3Q12094 313 aaKnown RBP7.24□□□□□ -1.25
YVC1YOR087W YAH1Q12184 172 aaKnown RBP7.22□□□□□ -1.25
YVC1YOR087W PRY3P47033 881 aa7.21□□□□□ -1.26
YVC1YOR087W YIL055CP40523 627 aaKnown RBP7.18□□□□□ -1.26
YVC1YOR087W YLR271WQ06152 274 aa7.16□□□□□ -1.26
YVC1YOR087W YKR023WP36119 530 aaKnown RBP7.11□□□□□ -1.27
YVC1YOR087W SAS10Q12136 610 aaPredicted RBP7.1□□□□□ -1.27
YVC1YOR087W MGA2P40578 1113 aa7.1□□□□□ -1.27
YVC1YOR087W LEU3P08638 886 aa7.08□□□□□ -1.28
YVC1YOR087W RSM7P47150 247 aa7.06□□□□□ -1.28
YVC1YOR087W MRPL32P25348 183 aa6.98□□□□□ -1.29
YVC1YOR087W TFC8Q12308 588 aa6.98□□□□□ -1.29
YVC1YOR087W CST9Q06032 482 aa6.96□□□□□ -1.3
YVC1YOR087W HOP09932 586 aa6.95□□□□□ -1.3
YVC1YOR087W PSD2P53037 1138 aaKnown RBP6.93□□□□□ -1.3
YVC1YOR087W AI2P03876 854 aa6.89□□□□□ -1.31
YVC1YOR087W DCD1P06773 312 aa6.87□□□□□ -1.31
YVC1YOR087W YCK3P39962 524 aa6.86□□□□□ -1.31
YVC1YOR087W BBC1P47068 1157 aa6.84□□□□□ -1.31
YVC1YOR087W RPN1P38764 993 aaKnown RBP6.84□□□□□ -1.31
YVC1YOR087W CDC27P38042 758 aa6.83□□□□□ -1.32
YVC1YOR087W HAA1Q12753 694 aaKnown RBP6.81□□□□□ -1.32
YVC1YOR087W RAM2P29703 316 aa6.79□□□□□ -1.32
YVC1YOR087W BCH2P36122 765 aa6.79□□□□□ -1.32
YVC1YOR087W CKB1P43639 278 aa6.78□□□□□ -1.32
YVC1YOR087W SET1P38827 1080 aaKnown RBP6.77□□□□□ -1.32
YVC1YOR087W IFH1P39520 1085 aa6.76□□□□□ -1.33
YVC1YOR087W YPR148CQ06523 435 aa6.76□□□□□ -1.33
YVC1YOR087W SPB4P25808 606 aaPredicted RBP6.74□□□□□ -1.33
YVC1YOR087W EPS1P40557 701 aa6.72□□□□□ -1.33
YVC1YOR087W VPS70P47161 811 aa6.72□□□□□ -1.33
YVC1YOR087W DMA2P53924 522 aa6.72□□□□□ -1.33
YVC1YOR087W MRM1P25270 412 aa6.71□□□□□ -1.34
YVC1YOR087W RTG3P38165 486 aa6.67□□□□□ -1.34
YVC1YOR087W RCR1P38212 213 aa6.66□□□□□ -1.34
YVC1YOR087W MAK11P20484 414 aaKnown RBP6.66□□□□□ -1.34
YVC1YOR087W BDF1P35817 686 aa6.65□□□□□ -1.35
YVC1YOR087W DSF2P38213 736 aa6.62□□□□□ -1.35
YVC1YOR087W PBS2P08018 668 aa6.59□□□□□ -1.36
YVC1YOR087W RLF2Q12495 606 aa6.59□□□□□ -1.36
YVC1YOR087W SCY1P53009 804 aa6.57□□□□□ -1.36
YVC1YOR087W YNR021WP53723 404 aaKnown RBP6.57□□□□□ -1.36
YVC1YOR087W NOP53Q12080 455 aaKnown RBP6.56□□□□□ -1.36
YVC1YOR087W COQ8P27697 501 aa6.55□□□□□ -1.36
YVC1YOR087W VPS29P38759 282 aa6.54□□□□□ -1.36
YVC1YOR087W KIN1P13185 1064 aa6.52□□□□□ -1.37
YVC1YOR087W UBP10P53874 792 aaPredicted RBP6.52□□□□□ -1.37
YVC1YOR087W ABP1P15891 592 aaKnown RBP6.51□□□□□ -1.37
YVC1YOR087W MAM3Q12296 706 aa6.51□□□□□ -1.37
YVC1YOR087W REF2P42073 533 aaPredicted RBP6.5□□□□□ -1.37
YVC1YOR087W HGH1P48362 394 aaKnown RBP6.5□□□□□ -1.37
YVC1YOR087W AIM7Q12156 149 aa6.49□□□□□ -1.37
YVC1YOR087W MAP2P38174 421 aaKnown RBP6.48□□□□□ -1.37
YVC1YOR087W YMR1P47147 688 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
YVC1YOR087W GLC3P32775 704 aa6.47□□□□□ -1.37
YVC1YOR087W MIF2P35201 549 aa6.46□□□□□ -1.38
YVC1YOR087W IES2P40154 320 aa6.46□□□□□ -1.38
YVC1YOR087W MAK21Q12176 1025 aaKnown RBP6.45□□□□□ -1.38
YVC1YOR087W SLX5P32828 619 aaKnown RBP6.43□□□□□ -1.38
YVC1YOR087W EDS1P38073 919 aa6.43□□□□□ -1.38
YVC1YOR087W STS1P38637 319 aa6.43□□□□□ -1.38
YVC1YOR087W NUP42P49686 430 aaKnown RBP6.43□□□□□ -1.38
YVC1YOR087W DIT2P21595 489 aa6.42□□□□□ -1.38
YVC1YOR087W DBP1P24784 617 aaKnown RBP6.4□□□□□ -1.38
YVC1YOR087W COX6P00427 148 aa6.4□□□□□ -1.39
YVC1YOR087W PTC3P34221 468 aaKnown RBP6.38□□□□□ -1.39
YVC1YOR087W YFR006WP43590 535 aa6.38□□□□□ -1.39
YVC1YOR087W ATF2P53296 535 aa6.38□□□□□ -1.39
YVC1YOR087W YGL015CP33199 130 aa6.37□□□□□ -1.39
YVC1YOR087W GUA1P38625 525 aaKnown RBP6.36□□□□□ -1.39
YVC1YOR087W YOR238WQ08634 303 aa6.36□□□□□ -1.39
YVC1YOR087W HPC2Q01448 625 aa6.35□□□□□ -1.39
YVC1YOR087W NSR1P27476 414 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
YVC1YOR087W VHR2P40041 505 aa6.28□□□□□ -1.4
YVC1YOR087W YDR090CQ03193 310 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms