RNA–Protein interactions for RNA: YMR213W

CEF1, Transcript of Essential splicing factor, yeastyeast

Gene CEF1, Length 1,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CEF1YMR213W DRS1P32892 752 aaKnown RBP11.46□□□□□ -0.58
CEF1YMR213W MTC1P47018 478 aaKnown RBP10.58□□□□□ -0.72
CEF1YMR213W BFR2Q06631 534 aaKnown RBP10.26□□□□□ -0.77
CEF1YMR213W TFA1P36100 482 aa10.24□□□□□ -0.77
CEF1YMR213W AVT3P36062 692 aa9.62□□□□□ -0.87
CEF1YMR213W DIP2Q12220 943 aaPredicted RBP9.47□□□□□ -0.89
CEF1YMR213W RQC2Q12532 1038 aaKnown RBP9.35□□□□□ -0.91
CEF1YMR213W NOP2P40991 618 aaKnown RBP9.28□□□□□ -0.92
CEF1YMR213W SPA2P23201 1466 aaKnown RBP9.2□□□□□ -0.94
CEF1YMR213W FAP1P53971 965 aa9.12□□□□□ -0.95
CEF1YMR213W SKI3P17883 1432 aaKnown RBP9.03□□□□□ -0.96
CEF1YMR213W SSN2P38931 1420 aa8.97□□□□□ -0.97
CEF1YMR213W NSR1P27476 414 aaKnown RBP RIP-Chip data8.96□□□□□ -0.97not detected
CEF1YMR213W SGS1P35187 1447 aa8.96□□□□□ -0.98
CEF1YMR213W CAB3P36076 571 aa8.87□□□□□ -0.99
CEF1YMR213W INO80P53115 1489 aa8.86□□□□□ -0.99
CEF1YMR213W EBP2P36049 427 aaKnown RBP8.85□□□□□ -0.99
CEF1YMR213W TAF7Q05021 590 aa8.8□□□□□ -1
CEF1YMR213W DMA1P38823 416 aa8.78□□□□□ -1
CEF1YMR213W TCB3Q03640 1545 aaKnown RBP8.76□□□□□ -1.01
CEF1YMR213W RSE1Q04693 1361 aaKnown RBP8.67□□□□□ -1.02
CEF1YMR213W MON2P48563 1636 aaPredicted RBP8.65□□□□□ -1.02
CEF1YMR213W PRY3P47033 881 aa8.64□□□□□ -1.03
CEF1YMR213W TY1B-DR4Q07793 1604 aa8.59□□□□□ -1.03
CEF1YMR213W YPR148CQ06523 435 aa8.58□□□□□ -1.04
CEF1YMR213W SIS2P36024 562 aa8.53□□□□□ -1.04
CEF1YMR213W ENP1P38333 483 aaKnown RBP8.5□□□□□ -1.05
CEF1YMR213W URN1Q06525 465 aaKnown RBP8.49□□□□□ -1.05
CEF1YMR213W MMS22Q06164 1454 aa8.49□□□□□ -1.05
CEF1YMR213W CHD1P32657 1468 aa8.45□□□□□ -1.06
CEF1YMR213W SWR1Q05471 1514 aa8.45□□□□□ -1.06
CEF1YMR213W PTP3P40048 928 aa8.43□□□□□ -1.06
CEF1YMR213W HSL1P34244 1518 aa8.43□□□□□ -1.06
CEF1YMR213W SPT6P23615 1451 aaKnown RBP8.41□□□□□ -1.06
CEF1YMR213W UFD4P33202 1483 aa8.41□□□□□ -1.06
CEF1YMR213W LEO1P38439 464 aa8.35□□□□□ -1.07
CEF1YMR213W ISW2Q08773 1120 aa8.34□□□□□ -1.07
CEF1YMR213W RPL17AP05740 184 aaKnown RBP8.33□□□□□ -1.08
CEF1YMR213W RPL17BP46990 184 aaKnown RBP8.33□□□□□ -1.08
CEF1YMR213W STH1P32597 1359 aa8.31□□□□□ -1.08
CEF1YMR213W XRN1P22147 1528 aaKnown RBP8.3□□□□□ -1.08
CEF1YMR213W SPP41P38904 1435 aa8.3□□□□□ -1.08
CEF1YMR213W MNN4P36044 1178 aa8.29□□□□□ -1.08
CEF1YMR213W RPG1P38249 964 aaKnown RBP8.28□□□□□ -1.08
CEF1YMR213W HIR3P47171 1648 aa8.27□□□□□ -1.09
CEF1YMR213W POL5P39985 1022 aaKnown RBP8.27□□□□□ -1.09
CEF1YMR213W TCB2P48231 1178 aa8.25□□□□□ -1.09
CEF1YMR213W SPT7P35177 1332 aa8.24□□□□□ -1.09
CEF1YMR213W DNA2P38859 1522 aa8.23□□□□□ -1.09
CEF1YMR213W SEC3P33332 1336 aaKnown RBP8.23□□□□□ -1.09
CEF1YMR213W KOG1P38873 1557 aa8.22□□□□□ -1.09
CEF1YMR213W TRM732Q03496 1420 aa8.22□□□□□ -1.09
CEF1YMR213W IKI3Q06706 1349 aaKnown RBP8.19□□□□□ -1.1
CEF1YMR213W CLC1P17891 233 aa8.19□□□□□ -1.1
CEF1YMR213W PRS1P32895 427 aaKnown RBP8.17□□□□□ -1.1
CEF1YMR213W RIM101P33400 625 aa8.17□□□□□ -1.1
CEF1YMR213W ECM5Q03214 1411 aa8.16□□□□□ -1.1
CEF1YMR213W SPT21P35209 758 aa8.15□□□□□ -1.1
CEF1YMR213W SSP1P38871 571 aa8.15□□□□□ -1.1
CEF1YMR213W YFR016CP43597 1233 aaKnown RBP8.15□□□□□ -1.11
CEF1YMR213W IME2P32581 645 aa8.12□□□□□ -1.11
CEF1YMR213W AIM44Q99299 758 aa8.12□□□□□ -1.11
CEF1YMR213W MYO2P19524 1574 aaKnown RBP8.1□□□□□ -1.11
CEF1YMR213W REB1P21538 810 aa8.1□□□□□ -1.11
CEF1YMR213W YCK3P39962 524 aa8.1□□□□□ -1.11
CEF1YMR213W SAS10Q12136 610 aaPredicted RBP8.09□□□□□ -1.11
CEF1YMR213W REV3P14284 1504 aa8.08□□□□□ -1.12
CEF1YMR213W EAF7P53911 425 aaKnown RBP8.07□□□□□ -1.12
CEF1YMR213W QCR6P00127 147 aa8.07□□□□□ -1.12
CEF1YMR213W RPS0BP46654 252 aaKnown RBP8.07□□□□□ -1.12
CEF1YMR213W THO2P53552 1597 aaKnown RBP8.05□□□□□ -1.12
CEF1YMR213W SIN3P22579 1536 aa8.05□□□□□ -1.12
CEF1YMR213W BUD4P47136 1447 aa8.05□□□□□ -1.12
CEF1YMR213W LEU3P08638 886 aa8.04□□□□□ -1.12
CEF1YMR213W PRI1P10363 409 aa8.04□□□□□ -1.12
CEF1YMR213W SSM4P40318 1319 aa8.03□□□□□ -1.12
CEF1YMR213W CFT1Q06632 1357 aaKnown RBP8.03□□□□□ -1.12
CEF1YMR213W PDR10P51533 1564 aa8.02□□□□□ -1.12
CEF1YMR213W PEP1P32319 1579 aa8.01□□□□□ -1.13
CEF1YMR213W STU1P38198 1513 aa8.01□□□□□ -1.13
CEF1YMR213W OXP1P28273 1286 aa8□□□□□ -1.13
CEF1YMR213W HAA1Q12753 694 aaKnown RBP8□□□□□ -1.13
CEF1YMR213W NUP170P38181 1502 aa8□□□□□ -1.13
CEF1YMR213W OPY1P38271 328 aa7.99□□□□□ -1.13
CEF1YMR213W RTT106P40161 455 aa7.99□□□□□ -1.13
CEF1YMR213W FPR3P38911 411 aaKnown RBP7.99□□□□□ -1.13
CEF1YMR213W CWC22P53333 577 aaKnown RBP7.99□□□□□ -1.13
CEF1YMR213W SRB8P25648 1427 aa7.98□□□□□ -1.13
CEF1YMR213W RPC31P17890 251 aa7.97□□□□□ -1.13
CEF1YMR213W SSK2P53599 1579 aa7.97□□□□□ -1.13
CEF1YMR213W YTA7P40340 1379 aa7.97□□□□□ -1.13
CEF1YMR213W YAH1Q12184 172 aaKnown RBP7.95□□□□□ -1.14
CEF1YMR213W TAF2P23255 1407 aa7.95□□□□□ -1.14
CEF1YMR213W TOP2P06786 1428 aaKnown RBP7.94□□□□□ -1.14
CEF1YMR213W YGR130CP53278 816 aa7.94□□□□□ -1.14
CEF1YMR213W SNF7P39929 240 aaKnown RBP7.93□□□□□ -1.14
CEF1YMR213W YLR419WQ06698 1435 aaKnown RBP7.92□□□□□ -1.14
CEF1YMR213W MLP2P40457 1679 aa7.92□□□□□ -1.14
CEF1YMR213W RLF2Q12495 606 aa7.92□□□□□ -1.14
CEF1YMR213W PAN1P32521 1480 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms