RNA–Protein interactions for RNA: YMR076C

PDS5, Transcript of Cohesion maintenance factor, yeastyeast

Gene PDS5, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDS5YMR076C DRS1P32892 752 aaKnown RBP8.65□□□□□ -1.03
PDS5YMR076C MTC1P47018 478 aaKnown RBP7.97□□□□□ -1.13
PDS5YMR076C BFR2Q06631 534 aaKnown RBP7.69□□□□□ -1.18
PDS5YMR076C TFA1P36100 482 aa7.36□□□□□ -1.23
PDS5YMR076C DIP2Q12220 943 aaPredicted RBP7.13□□□□□ -1.27
PDS5YMR076C AVT3P36062 692 aa7.04□□□□□ -1.28
PDS5YMR076C RQC2Q12532 1038 aaKnown RBP6.68□□□□□ -1.34
PDS5YMR076C RSE1Q04693 1361 aaKnown RBP6.54□□□□□ -1.36
PDS5YMR076C DMA1P38823 416 aa6.46□□□□□ -1.38
PDS5YMR076C PTP3P40048 928 aa6.44□□□□□ -1.38
PDS5YMR076C RPL17AP05740 184 aaKnown RBP6.39□□□□□ -1.39
PDS5YMR076C RPL17BP46990 184 aaKnown RBP6.39□□□□□ -1.39
PDS5YMR076C RPG1P38249 964 aaKnown RBP6.37□□□□□ -1.39
PDS5YMR076C ISW2Q08773 1120 aa6.35□□□□□ -1.39
PDS5YMR076C REB1P21538 810 aa6.25□□□□□ -1.41
PDS5YMR076C FAP1P53971 965 aa6.24□□□□□ -1.41
PDS5YMR076C YAH1Q12184 172 aaKnown RBP6.14□□□□□ -1.43
PDS5YMR076C PRI1P10363 409 aa6.08□□□□□ -1.44
PDS5YMR076C TAF7Q05021 590 aa6.08□□□□□ -1.44
PDS5YMR076C SSP1P38871 571 aa6.05□□□□□ -1.44
PDS5YMR076C TSR3Q12094 313 aaKnown RBP6.03□□□□□ -1.44
PDS5YMR076C SPT21P35209 758 aa6.01□□□□□ -1.45
PDS5YMR076C RIM101P33400 625 aa6□□□□□ -1.45
PDS5YMR076C AAD16Q02895 342 aa5.97□□□□□ -1.45
PDS5YMR076C OXP1P28273 1286 aa5.96□□□□□ -1.46
PDS5YMR076C YIL055CP40523 627 aaKnown RBP5.92□□□□□ -1.46
PDS5YMR076C YLR271WQ06152 274 aa5.88□□□□□ -1.47
PDS5YMR076C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47 RIP-Chip
PDS5YMR076C DCD1P06773 312 aa5.84□□□□□ -1.47
PDS5YMR076C HOP09932 586 aa5.83□□□□□ -1.48
PDS5YMR076C LEO1P38439 464 aa5.81□□□□□ -1.48
PDS5YMR076C PRY3P47033 881 aa5.8□□□□□ -1.48
PDS5YMR076C CST9Q06032 482 aa5.79□□□□□ -1.48
PDS5YMR076C YKR023WP36119 530 aaKnown RBP5.77□□□□□ -1.49
PDS5YMR076C RSM7P47150 247 aa5.74□□□□□ -1.49
PDS5YMR076C MGA2P40578 1113 aa5.72□□□□□ -1.49
PDS5YMR076C DMA2P53924 522 aa5.68□□□□□ -1.5
PDS5YMR076C MRPL32P25348 183 aa5.66□□□□□ -1.5
PDS5YMR076C TFC8Q12308 588 aa5.64□□□□□ -1.51
PDS5YMR076C AI2P03876 854 aa5.63□□□□□ -1.51
PDS5YMR076C SAS10Q12136 610 aaPredicted RBP5.62□□□□□ -1.51
PDS5YMR076C LEU3P08638 886 aa5.62□□□□□ -1.51
PDS5YMR076C SPB4P25808 606 aaPredicted RBP5.61□□□□□ -1.51
PDS5YMR076C CDC27P38042 758 aa5.61□□□□□ -1.51
PDS5YMR076C RCR1P38212 213 aa5.59□□□□□ -1.51
PDS5YMR076C VPS70P47161 811 aa5.58□□□□□ -1.52
PDS5YMR076C PSD2P53037 1138 aaKnown RBP5.57□□□□□ -1.52
PDS5YMR076C MRM1P25270 412 aa5.56□□□□□ -1.52
PDS5YMR076C RAM2P29703 316 aa5.56□□□□□ -1.52
PDS5YMR076C BCH2P36122 765 aa5.55□□□□□ -1.52
PDS5YMR076C SET1P38827 1080 aaKnown RBP5.53□□□□□ -1.52
PDS5YMR076C BBC1P47068 1157 aa5.51□□□□□ -1.53
PDS5YMR076C RPN1P38764 993 aaKnown RBP5.49□□□□□ -1.53
PDS5YMR076C EPS1P40557 701 aa5.47□□□□□ -1.53
PDS5YMR076C ABP1P15891 592 aaKnown RBP5.46□□□□□ -1.54
PDS5YMR076C SCY1P53009 804 aa5.44□□□□□ -1.54
PDS5YMR076C BDF1P35817 686 aa5.41□□□□□ -1.54
PDS5YMR076C GLC3P32775 704 aa5.38□□□□□ -1.55
PDS5YMR076C MIF2P35201 549 aa5.38□□□□□ -1.55
PDS5YMR076C YFR006WP43590 535 aa5.37□□□□□ -1.55
PDS5YMR076C RTG3P38165 486 aa5.36□□□□□ -1.55
PDS5YMR076C CKB1P43639 278 aa5.36□□□□□ -1.55
PDS5YMR076C PBS2P08018 668 aa5.35□□□□□ -1.55
PDS5YMR076C YCK3P39962 524 aa5.35□□□□□ -1.55
PDS5YMR076C KIN1P13185 1064 aa5.34□□□□□ -1.56
PDS5YMR076C COQ8P27697 501 aa5.33□□□□□ -1.56
PDS5YMR076C PIB1Q06651 286 aa5.33□□□□□ -1.56
PDS5YMR076C IES2P40154 320 aa5.32□□□□□ -1.56
PDS5YMR076C MAP2P38174 421 aaKnown RBP5.31□□□□□ -1.56
PDS5YMR076C MAK11P20484 414 aaKnown RBP5.3□□□□□ -1.56
PDS5YMR076C DIT2P21595 489 aa5.3□□□□□ -1.56
PDS5YMR076C RLF2Q12495 606 aa5.3□□□□□ -1.56
PDS5YMR076C VPS29P38759 282 aa5.29□□□□□ -1.56
PDS5YMR076C YPR148CQ06523 435 aa5.29□□□□□ -1.56
PDS5YMR076C EDS1P38073 919 aa5.27□□□□□ -1.57
PDS5YMR076C DSF2P38213 736 aa5.26□□□□□ -1.57
PDS5YMR076C MAM3Q12296 706 aa5.26□□□□□ -1.57
PDS5YMR076C STS1P38637 319 aa5.26□□□□□ -1.57
PDS5YMR076C GUA1P38625 525 aaKnown RBP5.25□□□□□ -1.57
PDS5YMR076C IFH1P39520 1085 aa5.25□□□□□ -1.57
PDS5YMR076C DBP1P24784 617 aaKnown RBP5.25□□□□□ -1.57
PDS5YMR076C HAA1Q12753 694 aaKnown RBP5.25□□□□□ -1.57
PDS5YMR076C ATF2P53296 535 aa5.23□□□□□ -1.57
PDS5YMR076C REF2P42073 533 aaPredicted RBP5.22□□□□□ -1.57
PDS5YMR076C YNR021WP53723 404 aaKnown RBP5.22□□□□□ -1.57
PDS5YMR076C VHR2P40041 505 aa5.21□□□□□ -1.58
PDS5YMR076C SLX5P32828 619 aaKnown RBP5.2□□□□□ -1.58
PDS5YMR076C NUP42P49686 430 aaKnown RBP5.19□□□□□ -1.58
PDS5YMR076C YMR1P47147 688 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
PDS5YMR076C PKC1P24583 1151 aa5.17□□□□□ -1.58
PDS5YMR076C TFB3Q03290 321 aa5.17□□□□□ -1.58
PDS5YMR076C YOR238WQ08634 303 aa5.17□□□□□ -1.58
PDS5YMR076C PTC3P34221 468 aaKnown RBP5.15□□□□□ -1.58
PDS5YMR076C YJL007CP47080 104 aa5.13□□□□□ -1.59
PDS5YMR076C HGH1P48362 394 aaKnown RBP5.11□□□□□ -1.59
PDS5YMR076C AIM7Q12156 149 aa5.11□□□□□ -1.59
PDS5YMR076C TYW1Q08960 810 aaKnown RBP5.1□□□□□ -1.59
PDS5YMR076C COX6P00427 148 aa5.08□□□□□ -1.6
PDS5YMR076C UBP10P53874 792 aaPredicted RBP5.08□□□□□ -1.6
PDS5YMR076C ATH1P48016 1211 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms