RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	RQC2	Q12532	1038 aa	Known RBP	6.57	□□□□□ -1.36
SPT23	YKL020C	BFR2	Q06631	534 aa	Known RBP	6.38	□□□□□ -1.39
SPT23	YKL020C	TAF7	Q05021	590 aa		6.04	□□□□□ -1.44
SPT23	YKL020C	URN1	Q06525	465 aa	Known RBP	5.93	□□□□□ -1.46
SPT23	YKL020C	NOP2	P40991	618 aa	Known RBP	5.69	□□□□□ -1.5
SPT23	YKL020C	SIS2	P36024	562 aa		5.66	□□□□□ -1.5
SPT23	YKL020C	EBP2	P36049	427 aa	Known RBP	5.65	□□□□□ -1.5
SPT23	YKL020C	TFA1	P36100	482 aa		5.62	□□□□□ -1.51
SPT23	YKL020C	CAB3	P36076	571 aa		5.59	□□□□□ -1.51
SPT23	YKL020C	SPA2	P23201	1466 aa	Known RBP	5.58	□□□□□ -1.52
SPT23	YKL020C	SKI3	P17883	1432 aa	Known RBP	5.54	□□□□□ -1.52
SPT23	YKL020C	DRS1	P32892	752 aa	Known RBP	5.53	□□□□□ -1.52
SPT23	YKL020C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
SPT23	YKL020C	YFR016C	P43597	1233 aa	Known RBP	5.48	□□□□□ -1.53
SPT23	YKL020C	YRB30	P53107	440 aa	Predicted RBP	5.42	□□□□□ -1.54
SPT23	YKL020C	RPS0B	P46654	252 aa	Known RBP	5.39	□□□□□ -1.55
SPT23	YKL020C	SSN2	P38931	1420 aa		5.39	□□□□□ -1.55
SPT23	YKL020C	AVT3	P36062	692 aa		5.38	□□□□□ -1.55
SPT23	YKL020C	DIP2	Q12220	943 aa	Predicted RBP	5.35	□□□□□ -1.55
SPT23	YKL020C	NAP1	P25293	417 aa	Known RBP	5.33	□□□□□ -1.56
SPT23	YKL020C	KRI1	P42846	591 aa	Known RBP	5.32	□□□□□ -1.56
SPT23	YKL020C	IOC4	Q04213	475 aa		5.31	□□□□□ -1.56
SPT23	YKL020C	SGS1	P35187	1447 aa		5.3	□□□□□ -1.56
SPT23	YKL020C	YPR148C	Q06523	435 aa		5.28	□□□□□ -1.56
SPT23	YKL020C	TCB3	Q03640	1545 aa	Known RBP	5.27	□□□□□ -1.57
SPT23	YKL020C	INO80	P53115	1489 aa		5.24	□□□□□ -1.57
SPT23	YKL020C	AIM44	Q99299	758 aa		5.21	□□□□□ -1.58
SPT23	YKL020C	MNN4	P36044	1178 aa		5.19	□□□□□ -1.58
SPT23	YKL020C	CWC22	P53333	577 aa	Known RBP	5.19	□□□□□ -1.58
SPT23	YKL020C	LEO1	P38439	464 aa		5.18	□□□□□ -1.58
SPT23	YKL020C	CHD1	P32657	1468 aa		5.17	□□□□□ -1.58
SPT23	YKL020C	TY1B-DR4	Q07793	1604 aa		5.14	□□□□□ -1.59
SPT23	YKL020C	ENP1	P38333	483 aa	Known RBP	5.14	□□□□□ -1.59
SPT23	YKL020C	UFD4	P33202	1483 aa		5.13	□□□□□ -1.59
SPT23	YKL020C	MMS22	Q06164	1454 aa		5.13	□□□□□ -1.59
SPT23	YKL020C	DEF1	P35732	738 aa	Known RBP	5.12	□□□□□ -1.59
SPT23	YKL020C	TCB2	P48231	1178 aa		5.1	□□□□□ -1.59
SPT23	YKL020C	SNU71	P53207	620 aa	Known RBP	5.1	□□□□□ -1.59
SPT23	YKL020C	DMA1	P38823	416 aa		5.1	□□□□□ -1.59
SPT23	YKL020C	STH1	P32597	1359 aa		5.1	□□□□□ -1.59
SPT23	YKL020C	ENV11	P53246	860 aa		5.08	□□□□□ -1.6
SPT23	YKL020C	MON2	P48563	1636 aa	Predicted RBP	5.07	□□□□□ -1.6
SPT23	YKL020C	NUG1	P40010	520 aa	Known RBP	5.06	□□□□□ -1.6
SPT23	YKL020C	NOP53	Q12080	455 aa	Known RBP	5.06	□□□□□ -1.6
SPT23	YKL020C	RLF2	Q12495	606 aa		5.06	□□□□□ -1.6
SPT23	YKL020C	TOP1	P04786	769 aa		5.05	□□□□□ -1.6
SPT23	YKL020C	RSE1	Q04693	1361 aa	Known RBP	5.05	□□□□□ -1.6
SPT23	YKL020C	XRN1	P22147	1528 aa	Known RBP	5.04	□□□□□ -1.6
SPT23	YKL020C	PSH1	Q12161	406 aa		5.04	□□□□□ -1.6
SPT23	YKL020C	MDG1	P53885	366 aa		5.03	□□□□□ -1.6
SPT23	YKL020C	SPP41	P38904	1435 aa		5.02	□□□□□ -1.61
SPT23	YKL020C	ECM5	Q03214	1411 aa		5.02	□□□□□ -1.61
SPT23	YKL020C	IFH1	P39520	1085 aa		5.01	□□□□□ -1.61
SPT23	YKL020C	PLP2	Q12017	286 aa		5.01	□□□□□ -1.61
SPT23	YKL020C	SPT7	P35177	1332 aa		5	□□□□□ -1.61
SPT23	YKL020C	CLC1	P17891	233 aa		4.99	□□□□□ -1.61
SPT23	YKL020C	RLP24	Q07915	199 aa	Known RBP	4.99	□□□□□ -1.61
SPT23	YKL020C	IME2	P32581	645 aa		4.98	□□□□□ -1.61
SPT23	YKL020C	SEC3	P33332	1336 aa	Known RBP	4.98	□□□□□ -1.61
SPT23	YKL020C	PEP1	P32319	1579 aa		4.98	□□□□□ -1.61
SPT23	YKL020C	HSP82	P02829	709 aa	Known RBP	4.97	□□□□□ -1.61
SPT23	YKL020C	PRS1	P32895	427 aa	Known RBP	4.97	□□□□□ -1.61
SPT23	YKL020C	TRM732	Q03496	1420 aa		4.96	□□□□□ -1.61
SPT23	YKL020C	SPT2	P06843	333 aa	Predicted RBP	4.96	□□□□□ -1.62
SPT23	YKL020C	QCR6	P00127	147 aa		4.95	□□□□□ -1.62
SPT23	YKL020C	FPR3	P38911	411 aa	Known RBP	4.94	□□□□□ -1.62
SPT23	YKL020C	YGR130C	P53278	816 aa		4.94	□□□□□ -1.62
SPT23	YKL020C	TIF4632	P39936	914 aa	Known RBP	4.94	□□□□□ -1.62
SPT23	YKL020C	ORC1	P54784	914 aa	Predicted RBP	4.94	□□□□□ -1.62
SPT23	YKL020C	SIN3	P22579	1536 aa		4.93	□□□□□ -1.62
SPT23	YKL020C	NUP170	P38181	1502 aa		4.93	□□□□□ -1.62
SPT23	YKL020C	HIF1	Q12373	385 aa		4.93	□□□□□ -1.62
SPT23	YKL020C	RPN1	P38764	993 aa	Known RBP	4.92	□□□□□ -1.62
SPT23	YKL020C	POL5	P39985	1022 aa	Known RBP	4.91	□□□□□ -1.62
SPT23	YKL020C	PDR10	P51533	1564 aa		4.91	□□□□□ -1.62
SPT23	YKL020C	OPY1	P38271	328 aa		4.91	□□□□□ -1.62
SPT23	YKL020C	RIX1	P38883	763 aa	Predicted RBP	4.91	□□□□□ -1.62
SPT23	YKL020C	IKI3	Q06706	1349 aa	Known RBP	4.9	□□□□□ -1.62
SPT23	YKL020C	RPS0A	P32905	252 aa	Known RBP	4.9	□□□□□ -1.62
SPT23	YKL020C	GIN4	Q12263	1142 aa		4.9	□□□□□ -1.62
SPT23	YKL020C	YTA7	P40340	1379 aa		4.89	□□□□□ -1.63
SPT23	YKL020C	TOA1	P32773	286 aa		4.89	□□□□□ -1.63
SPT23	YKL020C	SPT21	P35209	758 aa		4.89	□□□□□ -1.63
SPT23	YKL020C	FPR4	Q06205	392 aa	Predicted RBP	4.89	□□□□□ -1.63
SPT23	YKL020C	NHA1	Q99271	985 aa		4.89	□□□□□ -1.63
SPT23	YKL020C	TLG1	Q03322	224 aa		4.88	□□□□□ -1.63
SPT23	YKL020C	SAS10	Q12136	610 aa	Predicted RBP	4.88	□□□□□ -1.63
SPT23	YKL020C	MLP2	P40457	1679 aa		4.88	□□□□□ -1.63
SPT23	YKL020C	SRB8	P25648	1427 aa		4.88	□□□□□ -1.63
SPT23	YKL020C	TOP2	P06786	1428 aa	Known RBP	4.87	□□□□□ -1.63
SPT23	YKL020C	SPC110	P32380	944 aa		4.87	□□□□□ -1.63
SPT23	YKL020C	BRL1	P38770	471 aa		4.87	□□□□□ -1.63
SPT23	YKL020C	PIL1	P53252	339 aa	Known RBP	4.87	□□□□□ -1.63
SPT23	YKL020C	CFT1	Q06632	1357 aa	Known RBP	4.87	□□□□□ -1.63
SPT23	YKL020C	SPT16	P32558	1035 aa	Known RBP	4.87	□□□□□ -1.63
SPT23	YKL020C	YNL011C	P53980	444 aa		4.87	□□□□□ -1.63
SPT23	YKL020C	HSL1	P34244	1518 aa		4.87	□□□□□ -1.63
SPT23	YKL020C	YLR419W	Q06698	1435 aa	Known RBP	4.86	□□□□□ -1.63
SPT23	YKL020C	THO2	P53552	1597 aa	Known RBP	4.86	□□□□□ -1.63
SPT23	YKL020C	FUN12	P39730	1002 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms