RNA–Protein interactions for RNA: YKL009W

MRT4, Transcript of Protein involved in mRNA turnover and ribosome assembly, yeastyeast

Gene MRT4, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRT4YKL009W DRS1P32892 752 aaKnown RBP13.8□□□□□ -0.2
MRT4YKL009W MTC1P47018 478 aaKnown RBP13.31□□□□□ -0.28
MRT4YKL009W BFR2Q06631 534 aaKnown RBP12.12□□□□□ -0.47
MRT4YKL009W TFA1P36100 482 aa11.78□□□□□ -0.52
MRT4YKL009W AVT3P36062 692 aa11.65□□□□□ -0.54
MRT4YKL009W DIP2Q12220 943 aaPredicted RBP11.61□□□□□ -0.55
MRT4YKL009W RSE1Q04693 1361 aaKnown RBP10.8□□□□□ -0.68
MRT4YKL009W ISW2Q08773 1120 aa10.64□□□□□ -0.71
MRT4YKL009W RPG1P38249 964 aaKnown RBP10.57□□□□□ -0.72
MRT4YKL009W PRI1P10363 409 aa10.46□□□□□ -0.73
MRT4YKL009W FAP1P53971 965 aa10.43□□□□□ -0.74
MRT4YKL009W RPL17AP05740 184 aaKnown RBP10.4□□□□□ -0.74
MRT4YKL009W RPL17BP46990 184 aaKnown RBP10.4□□□□□ -0.74
MRT4YKL009W RQC2Q12532 1038 aaKnown RBP10.24□□□□□ -0.77
MRT4YKL009W AAD16Q02895 342 aa10.17□□□□□ -0.78
MRT4YKL009W REB1P21538 810 aa10.15□□□□□ -0.78
MRT4YKL009W SPT21P35209 758 aa10.12□□□□□ -0.79
MRT4YKL009W RIM101P33400 625 aa10.07□□□□□ -0.8
MRT4YKL009W TSR3Q12094 313 aaKnown RBP9.96□□□□□ -0.82
MRT4YKL009W PTP3P40048 928 aa9.94□□□□□ -0.82
MRT4YKL009W DMA1P38823 416 aa9.87□□□□□ -0.83
MRT4YKL009W OXP1P28273 1286 aa9.81□□□□□ -0.84
MRT4YKL009W PRY3P47033 881 aa9.79□□□□□ -0.84
MRT4YKL009W SSP1P38871 571 aa9.78□□□□□ -0.84
MRT4YKL009W YKR023WP36119 530 aaKnown RBP9.7□□□□□ -0.86
MRT4YKL009W YAH1Q12184 172 aaKnown RBP9.62□□□□□ -0.87
MRT4YKL009W YLR271WQ06152 274 aa9.59□□□□□ -0.87
MRT4YKL009W YIL055CP40523 627 aaKnown RBP9.51□□□□□ -0.89
MRT4YKL009W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
MRT4YKL009W MRPL32P25348 183 aa9.48□□□□□ -0.89
MRT4YKL009W TFC8Q12308 588 aa9.47□□□□□ -0.89
MRT4YKL009W HOP09932 586 aa9.46□□□□□ -0.9
MRT4YKL009W RSM7P47150 247 aa9.44□□□□□ -0.9
MRT4YKL009W DCD1P06773 312 aa9.39□□□□□ -0.91
MRT4YKL009W CDC27P38042 758 aa9.38□□□□□ -0.91
MRT4YKL009W YCK3P39962 524 aa9.37□□□□□ -0.91
MRT4YKL009W MGA2P40578 1113 aa9.36□□□□□ -0.91
MRT4YKL009W CST9Q06032 482 aa9.32□□□□□ -0.92
MRT4YKL009W PSD2P53037 1138 aaKnown RBP9.28□□□□□ -0.92
MRT4YKL009W AI2P03876 854 aa9.24□□□□□ -0.93
MRT4YKL009W SAS10Q12136 610 aaPredicted RBP9.23□□□□□ -0.93
MRT4YKL009W BCH2P36122 765 aa9.22□□□□□ -0.93
MRT4YKL009W LEO1P38439 464 aa9.17□□□□□ -0.94
MRT4YKL009W TAF7Q05021 590 aa9.14□□□□□ -0.95
MRT4YKL009W HAA1Q12753 694 aaKnown RBP9.14□□□□□ -0.95
MRT4YKL009W EPS1P40557 701 aa9.07□□□□□ -0.96
MRT4YKL009W BBC1P47068 1157 aa9.07□□□□□ -0.96
MRT4YKL009W RAM2P29703 316 aa9.06□□□□□ -0.96
MRT4YKL009W LEU3P08638 886 aa9.03□□□□□ -0.96
MRT4YKL009W BDF1P35817 686 aa9.01□□□□□ -0.97
MRT4YKL009W MRM1P25270 412 aa8.98□□□□□ -0.97
MRT4YKL009W RCR1P38212 213 aa8.98□□□□□ -0.97
MRT4YKL009W SCY1P53009 804 aa8.93□□□□□ -0.98
MRT4YKL009W SET1P38827 1080 aaKnown RBP8.89□□□□□ -0.99
MRT4YKL009W MAP2P38174 421 aaKnown RBP8.88□□□□□ -0.99
MRT4YKL009W RTG3P38165 486 aa8.86□□□□□ -0.99
MRT4YKL009W YPR148CQ06523 435 aa8.86□□□□□ -0.99
MRT4YKL009W UBP10P53874 792 aaPredicted RBP8.83□□□□□ -1
MRT4YKL009W VPS29P38759 282 aa8.82□□□□□ -1
MRT4YKL009W MAK11P20484 414 aaKnown RBP8.8□□□□□ -1
MRT4YKL009W VPS70P47161 811 aa8.79□□□□□ -1
MRT4YKL009W RPN1P38764 993 aaKnown RBP8.74□□□□□ -1.01
MRT4YKL009W CKB1P43639 278 aa8.74□□□□□ -1.01
MRT4YKL009W YGL015CP33199 130 aa8.71□□□□□ -1.02
MRT4YKL009W IFH1P39520 1085 aa8.71□□□□□ -1.02
MRT4YKL009W SPB4P25808 606 aaPredicted RBP8.7□□□□□ -1.02
MRT4YKL009W SLX5P32828 619 aaKnown RBP8.7□□□□□ -1.02
MRT4YKL009W COQ8P27697 501 aa8.69□□□□□ -1.02
MRT4YKL009W STS1P38637 319 aa8.66□□□□□ -1.02
MRT4YKL009W EDS1P38073 919 aa8.64□□□□□ -1.03
MRT4YKL009W DSF2P38213 736 aa8.63□□□□□ -1.03
MRT4YKL009W YMR1P47147 688 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
MRT4YKL009W DMA2P53924 522 aa8.63□□□□□ -1.03
MRT4YKL009W PBS2P08018 668 aa8.6□□□□□ -1.03
MRT4YKL009W NOP53Q12080 455 aaKnown RBP8.6□□□□□ -1.03
MRT4YKL009W DBP1P24784 617 aaKnown RBP8.59□□□□□ -1.03
MRT4YKL009W YFR006WP43590 535 aa8.59□□□□□ -1.03
MRT4YKL009W MIF2P35201 549 aa8.56□□□□□ -1.04
MRT4YKL009W YOR238WQ08634 303 aa8.52□□□□□ -1.05
MRT4YKL009W REF2P42073 533 aaPredicted RBP8.51□□□□□ -1.05
MRT4YKL009W PTC3P34221 468 aaKnown RBP8.5□□□□□ -1.05
MRT4YKL009W YNR021WP53723 404 aaKnown RBP8.49□□□□□ -1.05
MRT4YKL009W ABP1P15891 592 aaKnown RBP8.48□□□□□ -1.05
MRT4YKL009W NSR1P27476 414 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
MRT4YKL009W NUP42P49686 430 aaKnown RBP8.46□□□□□ -1.06
MRT4YKL009W DIT2P21595 489 aa8.45□□□□□ -1.06
MRT4YKL009W MAM3Q12296 706 aa8.45□□□□□ -1.06
MRT4YKL009W KIN1P13185 1064 aa8.44□□□□□ -1.06
MRT4YKL009W IES2P40154 320 aa8.44□□□□□ -1.06
MRT4YKL009W PIB1Q06651 286 aa8.44□□□□□ -1.06
MRT4YKL009W GLC3P32775 704 aa8.42□□□□□ -1.06
MRT4YKL009W TGL3P40308 642 aa8.41□□□□□ -1.06
MRT4YKL009W COX6P00427 148 aa8.4□□□□□ -1.06
MRT4YKL009W VMA1P17255 1071 aaKnown RBP8.4□□□□□ -1.06
MRT4YKL009W TIF4632P39936 914 aaKnown RBP8.39□□□□□ -1.07
MRT4YKL009W YAP5P40574 245 aa8.39□□□□□ -1.07
MRT4YKL009W YDR090CQ03193 310 aa8.38□□□□□ -1.07
MRT4YKL009W AIM7Q12156 149 aa8.38□□□□□ -1.07
MRT4YKL009W UBP14P38237 781 aaKnown RBP8.37□□□□□ -1.07
MRT4YKL009W MAK21Q12176 1025 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms