RNA–Protein interactions for RNA: YHR175W

CTR2, Transcript of Putative low-affinity copper transporter of the vacuolar membrane, yeastyeast

Gene CTR2, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR2YHR175W DRS1P32892 752 aaKnown RBP14.46□□□□□ -0.09
CTR2YHR175W MTC1P47018 478 aaKnown RBP13.94□□□□□ -0.18
CTR2YHR175W BFR2Q06631 534 aaKnown RBP12.71□□□□□ -0.37
CTR2YHR175W TFA1P36100 482 aa12.22□□□□□ -0.45
CTR2YHR175W DIP2Q12220 943 aaPredicted RBP12.17□□□□□ -0.46
CTR2YHR175W AVT3P36062 692 aa12.07□□□□□ -0.48
CTR2YHR175W FAP1P53971 965 aa12.07□□□□□ -0.48
CTR2YHR175W RSE1Q04693 1361 aaKnown RBP11.4□□□□□ -0.59
CTR2YHR175W ISW2Q08773 1120 aa11.33□□□□□ -0.6
CTR2YHR175W PRY3P47033 881 aa11.31□□□□□ -0.6
CTR2YHR175W PRI1P10363 409 aa11.19□□□□□ -0.62
CTR2YHR175W AAD16Q02895 342 aa11.19□□□□□ -0.62
CTR2YHR175W RPG1P38249 964 aaKnown RBP11.12□□□□□ -0.63
CTR2YHR175W RQC2Q12532 1038 aaKnown RBP11□□□□□ -0.65
CTR2YHR175W RPL17AP05740 184 aaKnown RBP10.92□□□□□ -0.66
CTR2YHR175W RPL17BP46990 184 aaKnown RBP10.92□□□□□ -0.66
CTR2YHR175W REB1P21538 810 aa10.79□□□□□ -0.68
CTR2YHR175W HAA1Q12753 694 aaKnown RBP10.69□□□□□ -0.7
CTR2YHR175W TSR3Q12094 313 aaKnown RBP10.54□□□□□ -0.72
CTR2YHR175W RIM101P33400 625 aa10.47□□□□□ -0.73
CTR2YHR175W YCK3P39962 524 aa10.47□□□□□ -0.73
CTR2YHR175W SPT21P35209 758 aa10.45□□□□□ -0.74
CTR2YHR175W PTP3P40048 928 aa10.4□□□□□ -0.74
CTR2YHR175W MRPL32P25348 183 aa10.25□□□□□ -0.77
CTR2YHR175W DMA1P38823 416 aa10.24□□□□□ -0.77
CTR2YHR175W SSP1P38871 571 aa10.24□□□□□ -0.77
CTR2YHR175W OXP1P28273 1286 aa10.13□□□□□ -0.79
CTR2YHR175W YIL055CP40523 627 aaKnown RBP10.13□□□□□ -0.79
CTR2YHR175W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.09□□□□□ -0.79not detected
CTR2YHR175W YAH1Q12184 172 aaKnown RBP10.08□□□□□ -0.8
CTR2YHR175W YKR023WP36119 530 aaKnown RBP10.05□□□□□ -0.8
CTR2YHR175W YLR271WQ06152 274 aa9.93□□□□□ -0.82
CTR2YHR175W RSM7P47150 247 aa9.9□□□□□ -0.82
CTR2YHR175W YGL015CP33199 130 aa9.88□□□□□ -0.83
CTR2YHR175W HOP09932 586 aa9.87□□□□□ -0.83
CTR2YHR175W TFC8Q12308 588 aa9.87□□□□□ -0.83
CTR2YHR175W MGA2P40578 1113 aa9.84□□□□□ -0.83
CTR2YHR175W DCD1P06773 312 aa9.75□□□□□ -0.85
CTR2YHR175W CDC27P38042 758 aa9.72□□□□□ -0.85
CTR2YHR175W AI2P03876 854 aa9.68□□□□□ -0.86
CTR2YHR175W BBC1P47068 1157 aa9.66□□□□□ -0.86
CTR2YHR175W CST9Q06032 482 aa9.63□□□□□ -0.87
CTR2YHR175W BCH2P36122 765 aa9.61□□□□□ -0.87
CTR2YHR175W PSD2P53037 1138 aaKnown RBP9.61□□□□□ -0.87
CTR2YHR175W LEO1P38439 464 aa9.59□□□□□ -0.87
CTR2YHR175W MON2P48563 1636 aaPredicted RBP9.56□□□□□ -0.88
CTR2YHR175W SAS10Q12136 610 aaPredicted RBP9.54□□□□□ -0.88
CTR2YHR175W INO80P53115 1489 aa9.53□□□□□ -0.88
CTR2YHR175W TAF7Q05021 590 aa9.49□□□□□ -0.89
CTR2YHR175W EPS1P40557 701 aa9.48□□□□□ -0.89
CTR2YHR175W UBP10P53874 792 aaPredicted RBP9.46□□□□□ -0.9
CTR2YHR175W LEU3P08638 886 aa9.4□□□□□ -0.9
CTR2YHR175W MRM1P25270 412 aa9.4□□□□□ -0.9
CTR2YHR175W BDF1P35817 686 aa9.4□□□□□ -0.9
CTR2YHR175W SCY1P53009 804 aa9.38□□□□□ -0.91
CTR2YHR175W RAM2P29703 316 aa9.35□□□□□ -0.91
CTR2YHR175W RTG3P38165 486 aa9.35□□□□□ -0.91
CTR2YHR175W SET1P38827 1080 aaKnown RBP9.32□□□□□ -0.92
CTR2YHR175W MAP2P38174 421 aaKnown RBP9.31□□□□□ -0.92
CTR2YHR175W IFH1P39520 1085 aa9.27□□□□□ -0.93
CTR2YHR175W CKB1P43639 278 aa9.25□□□□□ -0.93
CTR2YHR175W RCR1P38212 213 aa9.24□□□□□ -0.93
CTR2YHR175W SPB4P25808 606 aaPredicted RBP9.23□□□□□ -0.93
CTR2YHR175W MAK11P20484 414 aaKnown RBP9.22□□□□□ -0.93
CTR2YHR175W SLX5P32828 619 aaKnown RBP9.22□□□□□ -0.93
CTR2YHR175W VPS70P47161 811 aa9.21□□□□□ -0.94
CTR2YHR175W RPN1P38764 993 aaKnown RBP9.19□□□□□ -0.94
CTR2YHR175W YPR148CQ06523 435 aa9.18□□□□□ -0.94
CTR2YHR175W TIF4632P39936 914 aaKnown RBP9.15□□□□□ -0.94
CTR2YHR175W VPS29P38759 282 aa9.13□□□□□ -0.95
CTR2YHR175W YMR1P47147 688 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
CTR2YHR175W DNA2P38859 1522 aa9.1□□□□□ -0.95
CTR2YHR175W COQ8P27697 501 aa9.08□□□□□ -0.96
CTR2YHR175W NOP53Q12080 455 aaKnown RBP9.08□□□□□ -0.96
CTR2YHR175W BUD31P25337 157 aaPredicted RBP9.04□□□□□ -0.96
CTR2YHR175W MIF2P35201 549 aa9.04□□□□□ -0.96
CTR2YHR175W TGL3P40308 642 aa9.04□□□□□ -0.96
CTR2YHR175W PBS2P08018 668 aa9.01□□□□□ -0.97
CTR2YHR175W DBP1P24784 617 aaKnown RBP9.01□□□□□ -0.97
CTR2YHR175W DSF2P38213 736 aa8.98□□□□□ -0.97
CTR2YHR175W YOR238WQ08634 303 aa8.98□□□□□ -0.97
CTR2YHR175W STS1P38637 319 aa8.97□□□□□ -0.97
CTR2YHR175W YFR006WP43590 535 aa8.96□□□□□ -0.98
CTR2YHR175W REF2P42073 533 aaPredicted RBP8.94□□□□□ -0.98
CTR2YHR175W EDS1P38073 919 aa8.91□□□□□ -0.98
CTR2YHR175W YAP5P40574 245 aa8.91□□□□□ -0.98
CTR2YHR175W DMA2P53924 522 aa8.91□□□□□ -0.98
CTR2YHR175W NSR1P27476 414 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
CTR2YHR175W MAM3Q12296 706 aa8.9□□□□□ -0.98
CTR2YHR175W UBP9P39967 754 aa8.89□□□□□ -0.99
CTR2YHR175W PTC3P34221 468 aaKnown RBP8.88□□□□□ -0.99
CTR2YHR175W YNR021WP53723 404 aaKnown RBP8.88□□□□□ -0.99
CTR2YHR175W MAK21Q12176 1025 aaKnown RBP8.86□□□□□ -0.99
CTR2YHR175W SWR1Q05471 1514 aa8.85□□□□□ -0.99
CTR2YHR175W SGS1P35187 1447 aa8.85□□□□□ -0.99
CTR2YHR175W KOG1P38873 1557 aa8.82□□□□□ -1
CTR2YHR175W PIB1Q06651 286 aa8.82□□□□□ -1
CTR2YHR175W COX6P00427 148 aa8.81□□□□□ -1
CTR2YHR175W KIN1P13185 1064 aa8.81□□□□□ -1
CTR2YHR175W IES2P40154 320 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms