RNA–Protein interactions for RNA: YGR278W

CWC22, Transcript of Spliceosome-associated protein that is required for pre-mRNA splicing, yeastyeast

Gene CWC22, Length 1,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC22YGR278W DRS1P32892 752 aaKnown RBP8.26□□□□□ -1.09
CWC22YGR278W MTC1P47018 478 aaKnown RBP8.01□□□□□ -1.13
CWC22YGR278W FAP1P53971 965 aa7.61□□□□□ -1.19
CWC22YGR278W BFR2Q06631 534 aaKnown RBP7.22□□□□□ -1.25
CWC22YGR278W PRY3P47033 881 aa7.19□□□□□ -1.26
CWC22YGR278W DIP2Q12220 943 aaPredicted RBP6.96□□□□□ -1.29
CWC22YGR278W AVT3P36062 692 aa6.96□□□□□ -1.3
CWC22YGR278W TFA1P36100 482 aa6.94□□□□□ -1.3
CWC22YGR278W HAA1Q12753 694 aaKnown RBP6.73□□□□□ -1.33
CWC22YGR278W YCK3P39962 524 aa6.7□□□□□ -1.34
CWC22YGR278W AAD16Q02895 342 aa6.68□□□□□ -1.34
CWC22YGR278W PRI1P10363 409 aa6.56□□□□□ -1.36
CWC22YGR278W RSE1Q04693 1361 aaKnown RBP6.46□□□□□ -1.37
CWC22YGR278W ISW2Q08773 1120 aa6.39□□□□□ -1.39
CWC22YGR278W RPG1P38249 964 aaKnown RBP6.39□□□□□ -1.39
CWC22YGR278W RPL17AP05740 184 aaKnown RBP6.26□□□□□ -1.41
CWC22YGR278W RPL17BP46990 184 aaKnown RBP6.26□□□□□ -1.41
CWC22YGR278W TSR3Q12094 313 aaKnown RBP6.11□□□□□ -1.43
CWC22YGR278W REB1P21538 810 aa6.1□□□□□ -1.43
CWC22YGR278W SPT21P35209 758 aa6.09□□□□□ -1.43
CWC22YGR278W YGL015CP33199 130 aa6.03□□□□□ -1.44
CWC22YGR278W RIM101P33400 625 aa6.02□□□□□ -1.45
CWC22YGR278W BUD31P25337 157 aaPredicted RBP6.01□□□□□ -1.45
CWC22YGR278W PTP3P40048 928 aa5.96□□□□□ -1.45
CWC22YGR278W MRPL32P25348 183 aa5.94□□□□□ -1.46
CWC22YGR278W OXP1P28273 1286 aa5.9□□□□□ -1.47
CWC22YGR278W RQC2Q12532 1038 aaKnown RBP5.88□□□□□ -1.47
CWC22YGR278W YKR023WP36119 530 aaKnown RBP5.85□□□□□ -1.47
CWC22YGR278W DMA1P38823 416 aa5.84□□□□□ -1.47
CWC22YGR278W SSP1P38871 571 aa5.81□□□□□ -1.48
CWC22YGR278W YAH1Q12184 172 aaKnown RBP5.79□□□□□ -1.48
CWC22YGR278W YLR271WQ06152 274 aa5.74□□□□□ -1.49
CWC22YGR278W DCD1P06773 312 aa5.74□□□□□ -1.49
CWC22YGR278W HOP09932 586 aa5.74□□□□□ -1.49
CWC22YGR278W CDC27P38042 758 aa5.71□□□□□ -1.5
CWC22YGR278W TFC8Q12308 588 aa5.7□□□□□ -1.5
CWC22YGR278W YIL055CP40523 627 aaKnown RBP5.67□□□□□ -1.5
CWC22YGR278W SIS1P25294 352 aaKnown RBP5.63□□□□□ -1.51
CWC22YGR278W RSM7P47150 247 aa5.63□□□□□ -1.51
CWC22YGR278W CST9Q06032 482 aa5.62□□□□□ -1.51
CWC22YGR278W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
CWC22YGR278W BCH2P36122 765 aa5.57□□□□□ -1.52
CWC22YGR278W MGA2P40578 1113 aa5.57□□□□□ -1.52
CWC22YGR278W PSD2P53037 1138 aaKnown RBP5.55□□□□□ -1.52
CWC22YGR278W AI2P03876 854 aa5.54□□□□□ -1.52
CWC22YGR278W EPS1P40557 701 aa5.46□□□□□ -1.54
CWC22YGR278W UBP9P39967 754 aa5.45□□□□□ -1.54
CWC22YGR278W RCR1P38212 213 aa5.43□□□□□ -1.54
CWC22YGR278W BDF1P35817 686 aa5.43□□□□□ -1.54
CWC22YGR278W UBP10P53874 792 aaPredicted RBP5.42□□□□□ -1.54
CWC22YGR278W SAS10Q12136 610 aaPredicted RBP5.42□□□□□ -1.54
CWC22YGR278W RAM2P29703 316 aa5.41□□□□□ -1.54
CWC22YGR278W SCY1P53009 804 aa5.41□□□□□ -1.54
CWC22YGR278W BBC1P47068 1157 aa5.4□□□□□ -1.54
CWC22YGR278W MRM1P25270 412 aa5.4□□□□□ -1.55
CWC22YGR278W MAP2P38174 421 aaKnown RBP5.4□□□□□ -1.55
CWC22YGR278W LEO1P38439 464 aa5.28□□□□□ -1.56
CWC22YGR278W RTG3P38165 486 aa5.28□□□□□ -1.56
CWC22YGR278W VPS29P38759 282 aa5.28□□□□□ -1.56
CWC22YGR278W SET1P38827 1080 aaKnown RBP5.28□□□□□ -1.56
CWC22YGR278W LEU3P08638 886 aa5.26□□□□□ -1.57
CWC22YGR278W SLX5P32828 619 aaKnown RBP5.23□□□□□ -1.57
CWC22YGR278W TIF4632P39936 914 aaKnown RBP5.23□□□□□ -1.57
CWC22YGR278W TAF7Q05021 590 aa5.23□□□□□ -1.57
CWC22YGR278W MAK11P20484 414 aaKnown RBP5.23□□□□□ -1.57
CWC22YGR278W TGL3P40308 642 aa5.23□□□□□ -1.57
CWC22YGR278W STS1P38637 319 aa5.22□□□□□ -1.57
CWC22YGR278W YPR148CQ06523 435 aa5.22□□□□□ -1.57
CWC22YGR278W VPS70P47161 811 aa5.21□□□□□ -1.58
CWC22YGR278W YFR006WP43590 535 aa5.19□□□□□ -1.58
CWC22YGR278W COQ8P27697 501 aa5.18□□□□□ -1.58
CWC22YGR278W EDS1P38073 919 aa5.18□□□□□ -1.58
CWC22YGR278W DBP1P24784 617 aaKnown RBP5.14□□□□□ -1.59
CWC22YGR278W YMR1P47147 688 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
CWC22YGR278W PIB1Q06651 286 aa5.13□□□□□ -1.59
CWC22YGR278W SPB4P25808 606 aaPredicted RBP5.12□□□□□ -1.59
CWC22YGR278W MIF2P35201 549 aa5.12□□□□□ -1.59
CWC22YGR278W CKB1P43639 278 aa5.11□□□□□ -1.59
CWC22YGR278W YOR238WQ08634 303 aa5.11□□□□□ -1.59
CWC22YGR278W IFH1P39520 1085 aa5.09□□□□□ -1.6
CWC22YGR278W PBS2P08018 668 aa5.08□□□□□ -1.6
CWC22YGR278W DSF2P38213 736 aa5.08□□□□□ -1.6
CWC22YGR278W RPN1P38764 993 aaKnown RBP5.08□□□□□ -1.6
CWC22YGR278W PTC3P34221 468 aaKnown RBP5.06□□□□□ -1.6
CWC22YGR278W DMA2P53924 522 aa5.06□□□□□ -1.6
CWC22YGR278W ABP1P15891 592 aaKnown RBP5.03□□□□□ -1.6
CWC22YGR278W VMA1P17255 1071 aaKnown RBP5.03□□□□□ -1.6
CWC22YGR278W NSR1P27476 414 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
CWC22YGR278W NOP53Q12080 455 aaKnown RBP5.03□□□□□ -1.6
CWC22YGR278W YAP5P40574 245 aa5.02□□□□□ -1.61
CWC22YGR278W REF2P42073 533 aaPredicted RBP5.02□□□□□ -1.61
CWC22YGR278W DIT2P21595 489 aa5.01□□□□□ -1.61
CWC22YGR278W IES2P40154 320 aa5.01□□□□□ -1.61
CWC22YGR278W NUP42P49686 430 aaKnown RBP5□□□□□ -1.61
CWC22YGR278W GLC3P32775 704 aa5□□□□□ -1.61
CWC22YGR278W MAM3Q12296 706 aa4.99□□□□□ -1.61
CWC22YGR278W VHR2P40041 505 aa4.98□□□□□ -1.61
CWC22YGR278W YDR090CQ03193 310 aa4.98□□□□□ -1.61
CWC22YGR278W UBP14P38237 781 aaKnown RBP4.97□□□□□ -1.61
CWC22YGR278W SOL3P38858 249 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms