RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W DRS1P32892 752 aaKnown RBP9.19□□□□□ -0.94
YDR340WYDR340W MTC1P47018 478 aaKnown RBP8.84□□□□□ -0.99
YDR340WYDR340W FAP1P53971 965 aa8.5□□□□□ -1.05
YDR340WYDR340W BFR2Q06631 534 aaKnown RBP8.22□□□□□ -1.09
YDR340WYDR340W TFA1P36100 482 aa8.09□□□□□ -1.11
YDR340WYDR340W PRY3P47033 881 aa8.01□□□□□ -1.13
YDR340WYDR340W PRI1P10363 409 aa7.71□□□□□ -1.18
YDR340WYDR340W AAD16Q02895 342 aa7.71□□□□□ -1.18
YDR340WYDR340W AVT3P36062 692 aa7.65□□□□□ -1.18
YDR340WYDR340W DIP2Q12220 943 aaPredicted RBP7.62□□□□□ -1.19
YDR340WYDR340W YCK3P39962 524 aa7.53□□□□□ -1.2
YDR340WYDR340W RQC2Q12532 1038 aaKnown RBP7.49□□□□□ -1.21
YDR340WYDR340W HAA1Q12753 694 aaKnown RBP7.45□□□□□ -1.22
YDR340WYDR340W ISW2Q08773 1120 aa7.42□□□□□ -1.22
YDR340WYDR340W RPG1P38249 964 aaKnown RBP7.36□□□□□ -1.23
YDR340WYDR340W TSR3Q12094 313 aaKnown RBP7.28□□□□□ -1.24
YDR340WYDR340W RSE1Q04693 1361 aaKnown RBP7.04□□□□□ -1.28
YDR340WYDR340W MRPL32P25348 183 aa6.97□□□□□ -1.29
YDR340WYDR340W DMA1P38823 416 aa6.92□□□□□ -1.3
YDR340WYDR340W TAF7Q05021 590 aa6.83□□□□□ -1.32
YDR340WYDR340W YGL015CP33199 130 aa6.8□□□□□ -1.32
YDR340WYDR340W RPL17AP05740 184 aaKnown RBP6.75□□□□□ -1.33
YDR340WYDR340W PTP3P40048 928 aa6.75□□□□□ -1.33
YDR340WYDR340W RPL17BP46990 184 aaKnown RBP6.75□□□□□ -1.33
YDR340WYDR340W REB1P21538 810 aa6.73□□□□□ -1.33
YDR340WYDR340W LEO1P38439 464 aa6.57□□□□□ -1.36
YDR340WYDR340W CDC27P38042 758 aa6.56□□□□□ -1.36
YDR340WYDR340W RIM101P33400 625 aa6.54□□□□□ -1.36
YDR340WYDR340W SSP1P38871 571 aa6.53□□□□□ -1.36
YDR340WYDR340W SPT21P35209 758 aa6.5□□□□□ -1.37
YDR340WYDR340W BUD31P25337 157 aaPredicted RBP6.45□□□□□ -1.38
YDR340WYDR340W YKR023WP36119 530 aaKnown RBP6.42□□□□□ -1.38
YDR340WYDR340W UBP10P53874 792 aaPredicted RBP6.42□□□□□ -1.38
YDR340WYDR340W MAP2P38174 421 aaKnown RBP6.41□□□□□ -1.38
YDR340WYDR340W YAH1Q12184 172 aaKnown RBP6.4□□□□□ -1.38
YDR340WYDR340W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
YDR340WYDR340W OXP1P28273 1286 aa6.37□□□□□ -1.39
YDR340WYDR340W LEU3P08638 886 aa6.32□□□□□ -1.4
YDR340WYDR340W DCD1P06773 312 aa6.31□□□□□ -1.4
YDR340WYDR340W YIL055CP40523 627 aaKnown RBP6.31□□□□□ -1.4
YDR340WYDR340W SAS10Q12136 610 aaPredicted RBP6.31□□□□□ -1.4
YDR340WYDR340W HOP09932 586 aa6.3□□□□□ -1.4
YDR340WYDR340W YLR271WQ06152 274 aa6.3□□□□□ -1.4
YDR340WYDR340W TFC8Q12308 588 aa6.29□□□□□ -1.4
YDR340WYDR340W MGA2P40578 1113 aa6.23□□□□□ -1.41
YDR340WYDR340W SCY1P53009 804 aa6.2□□□□□ -1.42
YDR340WYDR340W RSM7P47150 247 aa6.19□□□□□ -1.42
YDR340WYDR340W TIF4632P39936 914 aaKnown RBP6.16□□□□□ -1.42
YDR340WYDR340W CST9Q06032 482 aa6.15□□□□□ -1.42
YDR340WYDR340W SLX5P32828 619 aaKnown RBP6.14□□□□□ -1.43
YDR340WYDR340W DMA2P53924 522 aa6.13□□□□□ -1.43
YDR340WYDR340W RPN1P38764 993 aaKnown RBP6.12□□□□□ -1.43
YDR340WYDR340W TGL3P40308 642 aa6.12□□□□□ -1.43
YDR340WYDR340W SIS1P25294 352 aaKnown RBP6.1□□□□□ -1.43
YDR340WYDR340W UBP9P39967 754 aa6.08□□□□□ -1.44
YDR340WYDR340W BCH2P36122 765 aa6.07□□□□□ -1.44
YDR340WYDR340W SPB4P25808 606 aaPredicted RBP6.05□□□□□ -1.44
YDR340WYDR340W PSD2P53037 1138 aaKnown RBP6.05□□□□□ -1.44
YDR340WYDR340W AI2P03876 854 aa6.04□□□□□ -1.44
YDR340WYDR340W SET1P38827 1080 aaKnown RBP6□□□□□ -1.45
YDR340WYDR340W CKB1P43639 278 aa5.99□□□□□ -1.45
YDR340WYDR340W VPS70P47161 811 aa5.99□□□□□ -1.45
YDR340WYDR340W RAM2P29703 316 aa5.98□□□□□ -1.45
YDR340WYDR340W BBC1P47068 1157 aa5.97□□□□□ -1.45
YDR340WYDR340W RLF2Q12495 606 aa5.95□□□□□ -1.46
YDR340WYDR340W YPR148CQ06523 435 aa5.94□□□□□ -1.46
YDR340WYDR340W ABP1P15891 592 aaKnown RBP5.92□□□□□ -1.46
YDR340WYDR340W IFH1P39520 1085 aa5.92□□□□□ -1.46
YDR340WYDR340W MRM1P25270 412 aa5.9□□□□□ -1.46
YDR340WYDR340W RCR1P38212 213 aa5.89□□□□□ -1.47
YDR340WYDR340W EPS1P40557 701 aa5.89□□□□□ -1.47
YDR340WYDR340W BDF1P35817 686 aa5.87□□□□□ -1.47
YDR340WYDR340W PBS2P08018 668 aa5.86□□□□□ -1.47
YDR340WYDR340W DSF2P38213 736 aa5.86□□□□□ -1.47
YDR340WYDR340W KIN1P13185 1064 aa5.85□□□□□ -1.47
YDR340WYDR340W RTG3P38165 486 aa5.84□□□□□ -1.47
YDR340WYDR340W MAK11P20484 414 aaKnown RBP5.83□□□□□ -1.48
YDR340WYDR340W YBL029C-AQ3E756 94 aa5.83□□□□□ -1.48
YDR340WYDR340W YNR021WP53723 404 aaKnown RBP5.82□□□□□ -1.48
YDR340WYDR340W MST1P07236 462 aa5.8□□□□□ -1.48
YDR340WYDR340W HGH1P48362 394 aaKnown RBP5.8□□□□□ -1.48
YDR340WYDR340W GLC3P32775 704 aa5.79□□□□□ -1.48
YDR340WYDR340W YOR238WQ08634 303 aa5.77□□□□□ -1.49
YDR340WYDR340W MAM3Q12296 706 aa5.77□□□□□ -1.49
YDR340WYDR340W COQ8P27697 501 aa5.76□□□□□ -1.49
YDR340WYDR340W IES2P40154 320 aa5.75□□□□□ -1.49
YDR340WYDR340W AIM7Q12156 149 aa5.75□□□□□ -1.49
YDR340WYDR340W REF2P42073 533 aaPredicted RBP5.73□□□□□ -1.49
YDR340WYDR340W DIT2P21595 489 aa5.72□□□□□ -1.49
YDR340WYDR340W NSR1P27476 414 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
YDR340WYDR340W VPS29P38759 282 aa5.72□□□□□ -1.49
YDR340WYDR340W VNX1P42839 908 aa5.72□□□□□ -1.49
YDR340WYDR340W GUA1P38625 525 aaKnown RBP5.71□□□□□ -1.5
YDR340WYDR340W MIF2P35201 549 aa5.7□□□□□ -1.5
YDR340WYDR340W NUP42P49686 430 aaKnown RBP5.7□□□□□ -1.5
YDR340WYDR340W ATF2P53296 535 aa5.69□□□□□ -1.5
YDR340WYDR340W NOP53Q12080 455 aaKnown RBP5.69□□□□□ -1.5
YDR340WYDR340W YAP5P40574 245 aa5.68□□□□□ -1.5
YDR340WYDR340W MAK21Q12176 1025 aaKnown RBP5.68□□□□□ -1.5
YDR340WYDR340W SPP1Q03012 353 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms