RNA–Protein interactions for RNA: ENST00000640361.1

PRICKLE1-217, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 4

Gene PRICKLE1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-217ENST00000640361 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
PRICKLE1-217ENST00000640361 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
PRICKLE1-217ENST00000640361 AEBP2Q6ZN18 517 aaPredicted RBP15.39■□□□□ 0.05
PRICKLE1-217ENST00000640361 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
PRICKLE1-217ENST00000640361 PHF23Q9BUL5 403 aaPredicted RBP13.82□□□□□ -0.2
PRICKLE1-217ENST00000640361 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
PRICKLE1-217ENST00000640361 DCAF1Q9Y4B6 1507 aa13.66□□□□□ -0.22
PRICKLE1-217ENST00000640361 MYO15BQ96JP2 1530 aa13.48□□□□□ -0.25
PRICKLE1-217ENST00000640361 NACADO15069 1562 aa13.25□□□□□ -0.29
PRICKLE1-217ENST00000640361 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
PRICKLE1-217ENST00000640361 SHROOM4Q9ULL8 1493 aa13.11□□□□□ -0.31
PRICKLE1-217ENST00000640361 ABCC9O60706 1549 aa13.1□□□□□ -0.31
PRICKLE1-217ENST00000640361 RB1CC1Q8TDY2 1594 aa13.07□□□□□ -0.32
PRICKLE1-217ENST00000640361 SCRIBQ14160 1630 aa12.94□□□□□ -0.34
PRICKLE1-217ENST00000640361 PLPPR3Q6T4P5 718 aa12.86□□□□□ -0.35
PRICKLE1-217ENST00000640361 SENP3Q9H4L4 574 aaPredicted RBP12.86□□□□□ -0.35
PRICKLE1-217ENST00000640361 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
PRICKLE1-217ENST00000640361 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
PRICKLE1-217ENST00000640361 RSF1Q96T23 1441 aaPredicted RBP12.66□□□□□ -0.38
PRICKLE1-217ENST00000640361 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
PRICKLE1-217ENST00000640361 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
PRICKLE1-217ENST00000640361 CECR2Q9BXF3 1484 aa12.55□□□□□ -0.4
PRICKLE1-217ENST00000640361 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
PRICKLE1-217ENST00000640361 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
PRICKLE1-217ENST00000640361 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
PRICKLE1-217ENST00000640361 WIZO95785 1651 aa12.45□□□□□ -0.42
PRICKLE1-217ENST00000640361 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
PRICKLE1-217ENST00000640361 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
PRICKLE1-217ENST00000640361 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
PRICKLE1-217ENST00000640361 EIF4G1Q04637 1599 aaKnown RBP12.26□□□□□ -0.45
PRICKLE1-217ENST00000640361 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
PRICKLE1-217ENST00000640361 HMGXB3Q12766 1538 aa12.22□□□□□ -0.45
PRICKLE1-217ENST00000640361 CCDC88BA6NC98 1476 aa12.21□□□□□ -0.45
PRICKLE1-217ENST00000640361 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
PRICKLE1-217ENST00000640361 NCAPD3P42695 1498 aa12.18□□□□□ -0.46
PRICKLE1-217ENST00000640361 ADRA2BP18089 450 aa12.13□□□□□ -0.47
PRICKLE1-217ENST00000640361 TRIM41Q8WV44 630 aa12.08□□□□□ -0.48
PRICKLE1-217ENST00000640361 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
PRICKLE1-217ENST00000640361 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
PRICKLE1-217ENST00000640361 EEA1Q15075 1411 aa11.98□□□□□ -0.49
PRICKLE1-217ENST00000640361 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
PRICKLE1-217ENST00000640361 FOXD1Q16676 465 aa11.94□□□□□ -0.5
PRICKLE1-217ENST00000640361 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
PRICKLE1-217ENST00000640361 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
PRICKLE1-217ENST00000640361 CFTRP13569 1480 aa11.93□□□□□ -0.5
PRICKLE1-217ENST00000640361 BIVM-ERCC5R4GMW8 1640 aa11.91□□□□□ -0.5
PRICKLE1-217ENST00000640361 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
PRICKLE1-217ENST00000640361 KCNA4P22459 653 aa11.87□□□□□ -0.51
PRICKLE1-217ENST00000640361 SYNJ1O43426 1573 aa11.85□□□□□ -0.51
PRICKLE1-217ENST00000640361 CADPSQ9ULU8 1353 aa11.82□□□□□ -0.52
PRICKLE1-217ENST00000640361 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
PRICKLE1-217ENST00000640361 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
PRICKLE1-217ENST00000640361 KIF21BO75037 1637 aa11.78□□□□□ -0.52
PRICKLE1-217ENST00000640361 SOGA1O94964 1423 aa11.73□□□□□ -0.53
PRICKLE1-217ENST00000640361 CUX1P39880 1505 aa11.73□□□□□ -0.53
PRICKLE1-217ENST00000640361 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
PRICKLE1-217ENST00000640361 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
PRICKLE1-217ENST00000640361 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
PRICKLE1-217ENST00000640361 GOLGA3Q08378 1498 aa11.71□□□□□ -0.53
PRICKLE1-217ENST00000640361 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
PRICKLE1-217ENST00000640361 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
PRICKLE1-217ENST00000640361 FAM9AQ8IZU1 332 aaPredicted RBP11.69□□□□□ -0.54
PRICKLE1-217ENST00000640361 ERICH3Q5RHP9 1530 aa11.69□□□□□ -0.54
PRICKLE1-217ENST00000640361 FANCD2Q9BXW9 1451 aa11.67□□□□□ -0.54
PRICKLE1-217ENST00000640361 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
PRICKLE1-217ENST00000640361 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
PRICKLE1-217ENST00000640361 KIF27Q86VH2 1401 aa11.65□□□□□ -0.54
PRICKLE1-217ENST00000640361 PDS5BQ9NTI5 1447 aa11.62□□□□□ -0.55
PRICKLE1-217ENST00000640361 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
PRICKLE1-217ENST00000640361 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
PRICKLE1-217ENST00000640361 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
PRICKLE1-217ENST00000640361 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
PRICKLE1-217ENST00000640361 ABCA10Q8WWZ4 1543 aa11.56□□□□□ -0.56
PRICKLE1-217ENST00000640361 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
PRICKLE1-217ENST00000640361 WDR97A6NE52 1622 aa11.55□□□□□ -0.56
PRICKLE1-217ENST00000640361 NESP48681 1621 aa11.54□□□□□ -0.56
PRICKLE1-217ENST00000640361 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
PRICKLE1-217ENST00000640361 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.56
PRICKLE1-217ENST00000640361 CUL7Q14999 1698 aa11.52□□□□□ -0.57
PRICKLE1-217ENST00000640361 CUX2O14529 1486 aa11.51□□□□□ -0.57
PRICKLE1-217ENST00000640361 POLA1P09884 1462 aaPredicted RBP11.51□□□□□ -0.57
PRICKLE1-217ENST00000640361 UBTFP17480 764 aaKnown RBP11.51□□□□□ -0.57
PRICKLE1-217ENST00000640361 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
PRICKLE1-217ENST00000640361 IGF1RP08069 1367 aa11.48□□□□□ -0.57
PRICKLE1-217ENST00000640361 CLIP1P30622 1438 aa11.48□□□□□ -0.57
PRICKLE1-217ENST00000640361 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
PRICKLE1-217ENST00000640361 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
PRICKLE1-217ENST00000640361 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
PRICKLE1-217ENST00000640361 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
PRICKLE1-217ENST00000640361 TARBP1Q13395 1621 aaKnown RBP11.43□□□□□ -0.58
PRICKLE1-217ENST00000640361 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
PRICKLE1-217ENST00000640361 CARMIL1Q5VZK9 1371 aa11.42□□□□□ -0.58
PRICKLE1-217ENST00000640361 WDR62O43379 1518 aa11.41□□□□□ -0.58
PRICKLE1-217ENST00000640361 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.59
PRICKLE1-217ENST00000640361 RAD54L2Q9Y4B4 1467 aa11.39□□□□□ -0.59
PRICKLE1-217ENST00000640361 SLC4A1APQ9BWU0 796 aaKnown RBP11.38□□□□□ -0.59
PRICKLE1-217ENST00000640361 GAPVD1Q14C86 1478 aa11.37□□□□□ -0.59
PRICKLE1-217ENST00000640361 EFCAB5A4FU69 1503 aa11.36□□□□□ -0.59
PRICKLE1-217ENST00000640361 IFT140Q96RY7 1462 aa11.36□□□□□ -0.59
PRICKLE1-217ENST00000640361 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms