RNA–Protein interactions for RNA: ENST00000640233.1

ZC3H12A-204, Transcript of zinc finger CCCH-type containing 12A, humanhuman

TSL 5

Gene ZC3H12A, Length 2,721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12A-204ENST00000640233 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
ZC3H12A-204ENST00000640233 CCDC180Q9P1Z9 1646 aa28.52■■■□□ 2.16
ZC3H12A-204ENST00000640233 SHROOM4Q9ULL8 1493 aa28.27■■■□□ 2.12
ZC3H12A-204ENST00000640233 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
ZC3H12A-204ENST00000640233 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
ZC3H12A-204ENST00000640233 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
ZC3H12A-204ENST00000640233 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.99
ZC3H12A-204ENST00000640233 ABCC9O60706 1549 aa27.19■■□□□ 1.94
ZC3H12A-204ENST00000640233 CHIC1Q5VXU3 224 aa26.82■■□□□ 1.88
ZC3H12A-204ENST00000640233 MYO15BQ96JP2 1530 aa26.74■■□□□ 1.87
ZC3H12A-204ENST00000640233 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
ZC3H12A-204ENST00000640233 NACADO15069 1562 aa26.42■■□□□ 1.82
ZC3H12A-204ENST00000640233 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
ZC3H12A-204ENST00000640233 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
ZC3H12A-204ENST00000640233 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
ZC3H12A-204ENST00000640233 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
ZC3H12A-204ENST00000640233 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
ZC3H12A-204ENST00000640233 PABPN1Q86U42 306 aaKnown RBP eCLIP25.87■■□□□ 1.73
ZC3H12A-204ENST00000640233 WIZO95785 1651 aa25.8■■□□□ 1.72
ZC3H12A-204ENST00000640233 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
ZC3H12A-204ENST00000640233 PCGF6Q9BYE7 350 aa25.75■■□□□ 1.71
ZC3H12A-204ENST00000640233 BAZ1AQ9NRL2 1556 aaPredicted RBP25.68■■□□□ 1.7
ZC3H12A-204ENST00000640233 HRCP23327 699 aa25.64■■□□□ 1.69
ZC3H12A-204ENST00000640233 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
ZC3H12A-204ENST00000640233 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
ZC3H12A-204ENST00000640233 SMARCA4P51532 1647 aa25.49■■□□□ 1.67
ZC3H12A-204ENST00000640233 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
ZC3H12A-204ENST00000640233 EIF4G1Q04637 1599 aaKnown RBP25.37■■□□□ 1.65
ZC3H12A-204ENST00000640233 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
ZC3H12A-204ENST00000640233 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
ZC3H12A-204ENST00000640233 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
ZC3H12A-204ENST00000640233 EHMT2Q96KQ7 1210 aa25.28■■□□□ 1.64
ZC3H12A-204ENST00000640233 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
ZC3H12A-204ENST00000640233 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
ZC3H12A-204ENST00000640233 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
ZC3H12A-204ENST00000640233 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
ZC3H12A-204ENST00000640233 ATAD2BQ9ULI0 1458 aa24.88■■□□□ 1.57
ZC3H12A-204ENST00000640233 SOGA1O94964 1423 aa24.87■■□□□ 1.57
ZC3H12A-204ENST00000640233 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
ZC3H12A-204ENST00000640233 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
ZC3H12A-204ENST00000640233 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
ZC3H12A-204ENST00000640233 EEA1Q15075 1411 aa24.75■■□□□ 1.55
ZC3H12A-204ENST00000640233 CSRNP3Q8WYN3 585 aa24.74■■□□□ 1.55
ZC3H12A-204ENST00000640233 ZEB1P37275 1124 aaPredicted RBP24.71■■□□□ 1.55
ZC3H12A-204ENST00000640233 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
ZC3H12A-204ENST00000640233 CEP162Q5TB80 1403 aa24.67■■□□□ 1.54
ZC3H12A-204ENST00000640233 SYNJ1O43426 1573 aa24.64■■□□□ 1.53
ZC3H12A-204ENST00000640233 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
ZC3H12A-204ENST00000640233 GOLGA3Q08378 1498 aa24.55■■□□□ 1.52
ZC3H12A-204ENST00000640233 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
ZC3H12A-204ENST00000640233 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
ZC3H12A-204ENST00000640233 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
ZC3H12A-204ENST00000640233 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
ZC3H12A-204ENST00000640233 HMGXB3Q12766 1538 aa24.42■■□□□ 1.5
ZC3H12A-204ENST00000640233 KIF21BO75037 1637 aa24.41■■□□□ 1.5
ZC3H12A-204ENST00000640233 TOP2BQ02880 1626 aa24.38■■□□□ 1.49
ZC3H12A-204ENST00000640233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.35■■□□□ 1.49
ZC3H12A-204ENST00000640233 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
ZC3H12A-204ENST00000640233 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
ZC3H12A-204ENST00000640233 RAPGEF2Q9Y4G8 1499 aa24.28■■□□□ 1.48
ZC3H12A-204ENST00000640233 CCER1Q8TC90 406 aaPredicted RBP24.27■■□□□ 1.48
ZC3H12A-204ENST00000640233 CLIP1P30622 1438 aa24.26■■□□□ 1.47
ZC3H12A-204ENST00000640233 CFTRP13569 1480 aa24.19■■□□□ 1.46
ZC3H12A-204ENST00000640233 CUX1P39880 1505 aa24.17■■□□□ 1.46
ZC3H12A-204ENST00000640233 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
ZC3H12A-204ENST00000640233 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
ZC3H12A-204ENST00000640233 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
ZC3H12A-204ENST00000640233 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
ZC3H12A-204ENST00000640233 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
ZC3H12A-204ENST00000640233 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
ZC3H12A-204ENST00000640233 APLP2Q06481 763 aa24.02■■□□□ 1.44
ZC3H12A-204ENST00000640233 PRDM2Q13029 1718 aa23.99■■□□□ 1.43
ZC3H12A-204ENST00000640233 CADPSQ9ULU8 1353 aa23.96■■□□□ 1.43
ZC3H12A-204ENST00000640233 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
ZC3H12A-204ENST00000640233 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
ZC3H12A-204ENST00000640233 ARAP1Q96P48 1450 aa23.89■■□□□ 1.41
ZC3H12A-204ENST00000640233 CUX2O14529 1486 aa23.82■■□□□ 1.4
ZC3H12A-204ENST00000640233 IGF1RP08069 1367 aa23.78■■□□□ 1.4
ZC3H12A-204ENST00000640233 NESP48681 1621 aa23.77■■□□□ 1.4
ZC3H12A-204ENST00000640233 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
ZC3H12A-204ENST00000640233 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
ZC3H12A-204ENST00000640233 ARHGAP35Q9NRY4 1499 aa23.73■■□□□ 1.39
ZC3H12A-204ENST00000640233 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
ZC3H12A-204ENST00000640233 DIEXFQ68CQ4 756 aaKnown RBP23.69■■□□□ 1.38
ZC3H12A-204ENST00000640233 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
ZC3H12A-204ENST00000640233 ZNF316A6NFI3 1004 aaPredicted RBP23.59■■□□□ 1.37
ZC3H12A-204ENST00000640233 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
ZC3H12A-204ENST00000640233 RAD54L2Q9Y4B4 1467 aa23.55■■□□□ 1.36
ZC3H12A-204ENST00000640233 RRBP1Q9P2E9 1410 aaKnown RBP23.55■■□□□ 1.36
ZC3H12A-204ENST00000640233 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
ZC3H12A-204ENST00000640233 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
ZC3H12A-204ENST00000640233 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
ZC3H12A-204ENST00000640233 CCNB3Q8WWL7 1395 aa23.46■■□□□ 1.35
ZC3H12A-204ENST00000640233 NEUROD1Q13562 356 aa23.45■■□□□ 1.34
ZC3H12A-204ENST00000640233 DHX57Q6P158 1386 aaKnown RBP23.45■■□□□ 1.34
ZC3H12A-204ENST00000640233 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
ZC3H12A-204ENST00000640233 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
ZC3H12A-204ENST00000640233 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
ZC3H12A-204ENST00000640233 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
ZC3H12A-204ENST00000640233 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms