RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
PRKCH-228ENST00000640011 CHIC1Q5VXU3 224 aa17.49■□□□□ 0.39
PRKCH-228ENST00000640011 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
PRKCH-228ENST00000640011 PHF23Q9BUL5 403 aaPredicted RBP15.5■□□□□ 0.07
PRKCH-228ENST00000640011 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
PRKCH-228ENST00000640011 ABCC9O60706 1549 aa14.47□□□□□ -0.09
PRKCH-228ENST00000640011 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
PRKCH-228ENST00000640011 CCDC180Q9P1Z9 1646 aa14.26□□□□□ -0.13
PRKCH-228ENST00000640011 FOXD1Q16676 465 aa13.84□□□□□ -0.19
PRKCH-228ENST00000640011 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
PRKCH-228ENST00000640011 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PRKCH-228ENST00000640011 NACADO15069 1562 aa13.59□□□□□ -0.23
PRKCH-228ENST00000640011 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
PRKCH-228ENST00000640011 ADRA2BP18089 450 aa13.56□□□□□ -0.24
PRKCH-228ENST00000640011 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
PRKCH-228ENST00000640011 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRKCH-228ENST00000640011 MYO15BQ96JP2 1530 aa13.37□□□□□ -0.27
PRKCH-228ENST00000640011 UNC13AQ9UPW8 1703 aa13.25□□□□□ -0.29
PRKCH-228ENST00000640011 BICRAQ9NZM4 1560 aa13.24□□□□□ -0.29
PRKCH-228ENST00000640011 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
PRKCH-228ENST00000640011 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
PRKCH-228ENST00000640011 DCAF1Q9Y4B6 1507 aa13.08□□□□□ -0.32
PRKCH-228ENST00000640011 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
PRKCH-228ENST00000640011 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
PRKCH-228ENST00000640011 ZCCHC6Q5VYS8 1495 aaKnown RBP13.03□□□□□ -0.32
PRKCH-228ENST00000640011 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
PRKCH-228ENST00000640011 DNAJC5Q9H3Z4 198 aa12.92□□□□□ -0.34
PRKCH-228ENST00000640011 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
PRKCH-228ENST00000640011 KCNA4P22459 653 aa12.71□□□□□ -0.37
PRKCH-228ENST00000640011 CUX2O14529 1486 aa12.67□□□□□ -0.38
PRKCH-228ENST00000640011 PPP4R3CPQ6ZMV5 832 aa12.66□□□□□ -0.38
PRKCH-228ENST00000640011 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
PRKCH-228ENST00000640011 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
PRKCH-228ENST00000640011 MSH5O43196 834 aa12.55□□□□□ -0.4
PRKCH-228ENST00000640011 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
PRKCH-228ENST00000640011 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
PRKCH-228ENST00000640011 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
PRKCH-228ENST00000640011 SMARCA4P51532 1647 aa12.33□□□□□ -0.43
PRKCH-228ENST00000640011 BAZ1BQ9UIG0 1483 aaKnown RBP12.33□□□□□ -0.44
PRKCH-228ENST00000640011 NESP48681 1621 aa12.33□□□□□ -0.44
PRKCH-228ENST00000640011 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
PRKCH-228ENST00000640011 BAZ1AQ9NRL2 1556 aaPredicted RBP12.3□□□□□ -0.44
PRKCH-228ENST00000640011 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
PRKCH-228ENST00000640011 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
PRKCH-228ENST00000640011 THOC2Q8NI27 1593 aaKnown RBP12.27□□□□□ -0.44
PRKCH-228ENST00000640011 PEG3Q9GZU2 1588 aa12.26□□□□□ -0.45
PRKCH-228ENST00000640011 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
PRKCH-228ENST00000640011 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
PRKCH-228ENST00000640011 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
PRKCH-228ENST00000640011 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
PRKCH-228ENST00000640011 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
PRKCH-228ENST00000640011 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
PRKCH-228ENST00000640011 MRC2Q9UBG0 1479 aa12.14□□□□□ -0.47
PRKCH-228ENST00000640011 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
PRKCH-228ENST00000640011 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
PRKCH-228ENST00000640011 WDR62O43379 1518 aa12.1□□□□□ -0.47
PRKCH-228ENST00000640011 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
PRKCH-228ENST00000640011 SLC4A1APQ9BWU0 796 aaKnown RBP12.09□□□□□ -0.47
PRKCH-228ENST00000640011 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
PRKCH-228ENST00000640011 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
PRKCH-228ENST00000640011 FANCD2Q9BXW9 1451 aa12□□□□□ -0.49
PRKCH-228ENST00000640011 CFTRP13569 1480 aa11.96□□□□□ -0.49
PRKCH-228ENST00000640011 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
PRKCH-228ENST00000640011 WIZO95785 1651 aa11.91□□□□□ -0.5
PRKCH-228ENST00000640011 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
PRKCH-228ENST00000640011 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
PRKCH-228ENST00000640011 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
PRKCH-228ENST00000640011 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
PRKCH-228ENST00000640011 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
PRKCH-228ENST00000640011 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
PRKCH-228ENST00000640011 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
PRKCH-228ENST00000640011 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
PRKCH-228ENST00000640011 RSF1Q96T23 1441 aaPredicted RBP11.81□□□□□ -0.52
PRKCH-228ENST00000640011 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
PRKCH-228ENST00000640011 ARHGEF11O15085 1522 aa11.8□□□□□ -0.52
PRKCH-228ENST00000640011 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
PRKCH-228ENST00000640011 ZBTB22O15209 634 aa11.75□□□□□ -0.53
PRKCH-228ENST00000640011 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
PRKCH-228ENST00000640011 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-228ENST00000640011 TOPBP1Q92547 1522 aa11.72□□□□□ -0.53
PRKCH-228ENST00000640011 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-228ENST00000640011 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
PRKCH-228ENST00000640011 CCDC88BA6NC98 1476 aa11.68□□□□□ -0.54
PRKCH-228ENST00000640011 EIF4G3O43432 1585 aaKnown RBP11.67□□□□□ -0.54
PRKCH-228ENST00000640011 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
PRKCH-228ENST00000640011 FBLN2P98095 1184 aa11.65□□□□□ -0.54
PRKCH-228ENST00000640011 ARAP1Q96P48 1450 aa11.64□□□□□ -0.55
PRKCH-228ENST00000640011 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRKCH-228ENST00000640011 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
PRKCH-228ENST00000640011 POLA1P09884 1462 aaPredicted RBP11.59□□□□□ -0.55
PRKCH-228ENST00000640011 CHD1O14646 1710 aa11.58□□□□□ -0.56
PRKCH-228ENST00000640011 WDR97A6NE52 1622 aa11.57□□□□□ -0.56
PRKCH-228ENST00000640011 SOGA1O94964 1423 aa11.56□□□□□ -0.56
PRKCH-228ENST00000640011 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
PRKCH-228ENST00000640011 FOXD4L1Q9NU39 408 aa11.56□□□□□ -0.56
PRKCH-228ENST00000640011 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
PRKCH-228ENST00000640011 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
PRKCH-228ENST00000640011 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
PRKCH-228ENST00000640011 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
PRKCH-228ENST00000640011 SNAPC4Q5SXM2 1469 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms