RNA–Protein interactions for RNA: ENST00000638845.1

SPIN3-214, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,010 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-214ENST00000638845 NISCHQ9Y2I1 1504 aa30.81■■■□□ 2.52
SPIN3-214ENST00000638845 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
SPIN3-214ENST00000638845 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
SPIN3-214ENST00000638845 SHROOM4Q9ULL8 1493 aa25.78■■□□□ 1.72
SPIN3-214ENST00000638845 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
SPIN3-214ENST00000638845 SUPT5HO00267 1087 aaKnown RBP25.19■■□□□ 1.62
SPIN3-214ENST00000638845 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
SPIN3-214ENST00000638845 MYO15BQ96JP2 1530 aa24.79■■□□□ 1.56
SPIN3-214ENST00000638845 CHIC1Q5VXU3 224 aa24.56■■□□□ 1.52
SPIN3-214ENST00000638845 ABCC9O60706 1549 aa24.55■■□□□ 1.52
SPIN3-214ENST00000638845 SCRIBQ14160 1630 aa24.49■■□□□ 1.51
SPIN3-214ENST00000638845 NACADO15069 1562 aa24.4■■□□□ 1.5
SPIN3-214ENST00000638845 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
SPIN3-214ENST00000638845 RB1CC1Q8TDY2 1594 aa24.01■■□□□ 1.43
SPIN3-214ENST00000638845 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
SPIN3-214ENST00000638845 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
SPIN3-214ENST00000638845 WIZO95785 1651 aa23.73■■□□□ 1.39
SPIN3-214ENST00000638845 LOC105371045A0A1W2PR82 267 aa23.69■■□□□ 1.38
SPIN3-214ENST00000638845 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
SPIN3-214ENST00000638845 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
SPIN3-214ENST00000638845 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
SPIN3-214ENST00000638845 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
SPIN3-214ENST00000638845 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
SPIN3-214ENST00000638845 HRCP23327 699 aa23.46■■□□□ 1.35
SPIN3-214ENST00000638845 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
SPIN3-214ENST00000638845 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
SPIN3-214ENST00000638845 BICRAQ9NZM4 1560 aa23.36■■□□□ 1.33
SPIN3-214ENST00000638845 SMARCA2P51531 1590 aa23.29■■□□□ 1.32
SPIN3-214ENST00000638845 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
SPIN3-214ENST00000638845 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
SPIN3-214ENST00000638845 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
SPIN3-214ENST00000638845 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
SPIN3-214ENST00000638845 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
SPIN3-214ENST00000638845 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
SPIN3-214ENST00000638845 ATAD2BQ9ULI0 1458 aa22.92■■□□□ 1.26
SPIN3-214ENST00000638845 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.26
SPIN3-214ENST00000638845 PPARGC1BQ86YN6 1023 aaKnown RBP22.84■■□□□ 1.25
SPIN3-214ENST00000638845 EEA1Q15075 1411 aa22.82■■□□□ 1.24
SPIN3-214ENST00000638845 SOGA1O94964 1423 aa22.8■■□□□ 1.24
SPIN3-214ENST00000638845 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
SPIN3-214ENST00000638845 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
SPIN3-214ENST00000638845 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.23
SPIN3-214ENST00000638845 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
SPIN3-214ENST00000638845 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
SPIN3-214ENST00000638845 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
SPIN3-214ENST00000638845 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
SPIN3-214ENST00000638845 ZEB1P37275 1124 aaPredicted RBP22.64■■□□□ 1.22
SPIN3-214ENST00000638845 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
SPIN3-214ENST00000638845 HMGXB3Q12766 1538 aa22.58■■□□□ 1.2
SPIN3-214ENST00000638845 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
SPIN3-214ENST00000638845 KIF21BO75037 1637 aa22.53■■□□□ 1.2
SPIN3-214ENST00000638845 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
SPIN3-214ENST00000638845 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
SPIN3-214ENST00000638845 BIVM-ERCC5R4GMW8 1640 aa22.45■■□□□ 1.18
SPIN3-214ENST00000638845 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
SPIN3-214ENST00000638845 CFTRP13569 1480 aa22.3■■□□□ 1.16
SPIN3-214ENST00000638845 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
SPIN3-214ENST00000638845 CUX1P39880 1505 aa22.26■■□□□ 1.15
SPIN3-214ENST00000638845 CLIP1P30622 1438 aa22.26■■□□□ 1.15
SPIN3-214ENST00000638845 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
SPIN3-214ENST00000638845 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
SPIN3-214ENST00000638845 PRXQ9BXM0 1461 aa22.2■■□□□ 1.14
SPIN3-214ENST00000638845 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
SPIN3-214ENST00000638845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
SPIN3-214ENST00000638845 TTBK1Q5TCY1 1321 aaPredicted RBP22.14■■□□□ 1.13
SPIN3-214ENST00000638845 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
SPIN3-214ENST00000638845 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
SPIN3-214ENST00000638845 CADPSQ9ULU8 1353 aa22.03■■□□□ 1.12
SPIN3-214ENST00000638845 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
SPIN3-214ENST00000638845 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
SPIN3-214ENST00000638845 APLP2Q06481 763 aa21.9■■□□□ 1.1
SPIN3-214ENST00000638845 CUX2O14529 1486 aa21.87■■□□□ 1.09
SPIN3-214ENST00000638845 FGD5Q6ZNL6 1462 aa21.87■■□□□ 1.09
SPIN3-214ENST00000638845 RANGAP1P46060 587 aaPredicted RBP21.87■■□□□ 1.09
SPIN3-214ENST00000638845 IGF1RP08069 1367 aa21.85■■□□□ 1.09
SPIN3-214ENST00000638845 ARHGAP35Q9NRY4 1499 aa21.82■■□□□ 1.08
SPIN3-214ENST00000638845 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
SPIN3-214ENST00000638845 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
SPIN3-214ENST00000638845 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
SPIN3-214ENST00000638845 CARMIL1Q5VZK9 1371 aa21.73■■□□□ 1.07
SPIN3-214ENST00000638845 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
SPIN3-214ENST00000638845 RRBP1Q9P2E9 1410 aaKnown RBP21.69■■□□□ 1.06
SPIN3-214ENST00000638845 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
SPIN3-214ENST00000638845 ABCA10Q8WWZ4 1543 aa21.67■■□□□ 1.06
SPIN3-214ENST00000638845 NESP48681 1621 aa21.65■■□□□ 1.06
SPIN3-214ENST00000638845 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
SPIN3-214ENST00000638845 MAP3K1Q13233 1512 aa21.64■■□□□ 1.05
SPIN3-214ENST00000638845 LAMC3Q9Y6N6 1575 aa21.63■■□□□ 1.05
SPIN3-214ENST00000638845 DIEXFQ68CQ4 756 aaKnown RBP21.62■■□□□ 1.05
SPIN3-214ENST00000638845 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
SPIN3-214ENST00000638845 TIAM1Q13009 1591 aa21.58■■□□□ 1.04
SPIN3-214ENST00000638845 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
SPIN3-214ENST00000638845 CUL7Q14999 1698 aa21.56■■□□□ 1.04
SPIN3-214ENST00000638845 WDR97A6NE52 1622 aa21.55■■□□□ 1.04
SPIN3-214ENST00000638845 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
SPIN3-214ENST00000638845 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
SPIN3-214ENST00000638845 CCNB3Q8WWL7 1395 aa21.53■■□□□ 1.04
SPIN3-214ENST00000638845 DHX57Q6P158 1386 aaKnown RBP21.52■■□□□ 1.04
SPIN3-214ENST00000638845 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
SPIN3-214ENST00000638845 CFAP43Q8NDM7 1665 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms